Basic Information
Locus ID:
Lb4G22952
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 53751063 | 53755610 | + | Lb4G22952 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 73,780.82 Da | 44.45 | 83.44 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 332 | 626 | 2.03333E-124 | - |
| CDD | cd06429 | GT8_like_1 | 332 | 626 | 2.03333E-124 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 301 | 612 | 7.4E-94 | IPR002495 |
| Pfam | PF01501 | Glycosyl transferase family 8 | 301 | 612 | 7.4E-94 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 333 | 638 | 5.34E-68 | IPR029044 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 333 | 638 | 5.34E-68 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 334 | 634 | 4.3E-45 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 334 | 634 | 4.3E-45 | IPR029044 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 169 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 149 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 169 | - | - |
| Coils | Coil | Coil | 263 | 283 | - | - |
| Coils | Coil | Coil | 263 | 283 | - | - |
| Coils | Coil | Coil | 211 | 231 | - | - |
| Coils | Coil | Coil | 211 | 231 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47780.1 | galacturonosyltransferase 4. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_021766720.1 | probable galacturonosyltransferase 4 [Chenopodium quinoa] | 0 |
| Q93ZX7 | Probable galacturonosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=GAUT4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M1G8 | Hexosyltransferase OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology