Basic Information
Locus ID:
Lb4G22860
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 50619981 | 50621344 | + | Lb4G22860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 23,418.52 Da | 29.61 | 100.19 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 24 | 103 | 1.1E-13 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 108 | 171 | 3.9E-14 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 24 | 103 | 1.1E-13 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 108 | 171 | 3.9E-14 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 171 | 1.83E-48 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 171 | 1.83E-48 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 96 | 1.5E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 97 | 214 | 1.3E-24 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 96 | 1.5E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 97 | 214 | 1.3E-24 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 214 | 14.534713 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 214 | 14.534713 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 49 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 49 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23250.1 | kinases;protein kinases. | 0 |
| RefSeq | XP_021803412.1 | cysteine-rich receptor-like protein kinase 10, partial [Prunus avium] | 0 |
| Q8L710 | Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis thaliana OX=3702 GN=CRK17 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6P5RL74 | cysteine-rich receptor-like protein kinase 10 OS=Prunus avium OX=42229 GN=LOC110747569 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 1 | Ftri11G13932 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-3507 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb4G22858, Lb4G22860 |