Basic Information
Locus ID:
Lb4G22858
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 50550795 | 50564491 | + | Lb4G22858 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 39,771.00 Da | 35.85 | 95.59 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 27 | 287 | 3.12877E-91 | - |
| CDD | cd14066 | STKc_IRAK | 27 | 287 | 3.12877E-91 | - |
| Pfam | PF00069 | Protein kinase domain | 22 | 282 | 2.2E-40 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 22 | 282 | 2.2E-40 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 286 | 1.13E-71 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 286 | 1.13E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 97 | 304 | 2.7E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 96 | 9.5E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 97 | 304 | 2.7E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 96 | 9.5E-35 | - |
| SMART | SM00220 | serkin_6 | 21 | 284 | 2.3E-20 | IPR000719 |
| SMART | SM00220 | serkin_6 | 21 | 284 | 2.3E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 21 | 293 | 32.272881 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 21 | 293 | 32.272881 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 142 | 154 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 142 | 154 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11530.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 34. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_048447020.1 | cysteine-rich receptor-like protein kinase 10 [Pyrus x bretschneideri] | 0 |
| Q9LDQ3 | Cysteine-rich receptor-like protein kinase 34 OS=Arabidopsis thaliana OX=3702 GN=CRK34 PE=3 SV=3 | 0 | |
| TrEMBL | A0A6P5RL74 | cysteine-rich receptor-like protein kinase 10 OS=Prunus avium OX=42229 GN=LOC110747569 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asteraceae | Flaveria trinervia | 1 | Ftri11G13932 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-3507 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb4G22858, Lb4G22860 |