Basic Information
Locus ID:
Lb4G22730
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 46141992 | 46143920 | - | Lb4G22730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 29,829.26 Da | 40.58 | 102.37 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 104 | 185 | 2.1E-7 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 104 | 185 | 2.1E-7 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 47 | - | - |
| Coils | Coil | Coil | 110 | 130 | - | - |
| Coils | Coil | Coil | 110 | 130 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_021896127.1 | LOW QUALITY PROTEIN: zinc finger protein BRUTUS-like [Carica papaya] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J7NF81 | Zinc finger protein BRUTUS OS=Kingdonia uniflora OX=39325 GN=GIB67_012557 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology