HalophFGD

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Basic Information
Locus ID: Lb4G22660
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: Plant transposase (Ptta/En/Spm family)
Maps and Mapping Data
Chromosome Start End Strand ID
chr04 43238987 43241663 - Lb4G22660
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.30 17,829.23 Da 34.80 78.88 -0.56
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03004 Plant transposase (Ptta/En/Spm family) 4 81 6.8E-7 IPR004252
Pfam PF03004 Plant transposase (Ptta/En/Spm family) 4 81 6.8E-7 IPR004252
Best hit
Source Best Hit ID Description E-value
RefSeq XP_039688420.1 uncharacterized protein LOC112419972 [Medicago truncatula] 0
TrEMBL A0A0B2PJE9 Alcohol dehydrogenase transcription factor myb/sant-like protein (Fragment) OS=Glycine soja OX=3848 GN=glysoja_042621 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plantaginaceae Plantago ovata 1 Pov_00029966
Plumbaginaceae Limonium bicolor 80 Lb0G36886, Lb0G36887, Lb0G37772, Lb0G38155, Lb0G38193 ...
Lb0G38347, Lb1G00948, Lb1G01147, Lb1G01591, Lb1G02625, Lb1G02820, Lb1G02852, Lb1G04343, Lb1G04639, Lb1G05087, Lb1G05597, Lb1G05963, Lb1G06535, Lb1G07279, Lb1G07281, Lb1G07990, Lb1G08043, Lb2G09223, Lb2G09468, Lb2G09844, Lb2G09848, Lb2G11693, Lb2G12153, Lb2G13242, Lb2G13325, Lb2G14500, Lb2G14591, Lb2G14761, Lb2G15067, Lb3G15627, Lb3G15827, Lb3G15894, Lb3G15899, Lb3G15900, Lb3G16217, Lb3G17174, Lb3G17349, Lb3G17676, Lb3G18214, Lb3G19096, Lb3G19232, Lb3G19600, Lb3G20294, Lb3G20487, Lb3G20488, Lb3G20490, Lb4G22660, Lb4G22735, Lb4G23163, Lb4G23298, Lb4G24426, Lb4G25227, Lb4G25897, Lb4G26010, Lb4G26063, Lb4G26366, Lb5G26727, Lb5G28015, Lb5G29538, Lb6G29862, Lb6G30293, Lb6G30330, Lb6G30593, Lb6G31279, Lb6G32079, Lb7G32807, Lb7G33414, Lb7G33483, Lb7G33604, Lb7G34482, Lb7G34630, Lb7G35316, Lb8G35799, Lb8G35833, Lb8G36218
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.