Basic Information
Locus ID:
Lb4G22655
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 43021433 | 43065246 | + | Lb4G22655 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.49 | 64,663.77 Da | 42.92 | 78.19 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 23 | 230 | 3.9E-7 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 471 | 510 | 1.07E-5 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 23 | 230 | 3.9E-7 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 471 | 510 | 1.07E-5 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 466 | 518 | 1.8E-9 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 466 | 518 | 1.8E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 560 | 587 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 587 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 587 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 560 | 587 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 431 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 431 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 317 | 337 | - | - |
| Coils | Coil | Coil | 190 | 210 | - | - |
| Coils | Coil | Coil | 190 | 210 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_010691596.1 | sister chromatid cohesion protein PDS5 homolog E isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RUR0 | Tudor domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_026500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology