Basic Information
Locus ID:
Lb4G22638
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
PERK1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 42386964 | 42420600 | - | Lb4G22638 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 139,502.05 Da | 66.02 | 58.23 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 958 | 1165 | 6.2E-45 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 353 | 622 | 5.2E-47 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 958 | 1165 | 6.2E-45 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 353 | 622 | 5.2E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 936 | 1228 | 1.08E-77 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 322 | 622 | 8.5E-81 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 322 | 622 | 8.5E-81 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 936 | 1228 | 1.08E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 928 | 1029 | 4.5E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 331 | 423 | 2.0E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 424 | 633 | 1.2E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 928 | 1029 | 4.5E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1030 | 1238 | 5.8E-62 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1030 | 1238 | 5.8E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 331 | 423 | 2.0E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 424 | 633 | 1.2E-61 | - |
| SMART | SM00220 | serkin_6 | 348 | 585 | 2.9E-32 | IPR000719 |
| SMART | SM00220 | serkin_6 | 348 | 585 | 2.9E-32 | IPR000719 |
| SMART | SM00220 | serkin_6 | 954 | 1223 | 9.6E-35 | IPR000719 |
| SMART | SM00220 | serkin_6 | 954 | 1223 | 9.6E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 954 | 1233 | 36.951237 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 348 | 628 | 36.739227 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 348 | 628 | 36.739227 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 954 | 1233 | 36.951237 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 960 | 982 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 354 | 376 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 468 | 480 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1074 | 1086 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 960 | 982 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 468 | 480 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 354 | 376 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1074 | 1086 | - | IPR008271 |
| PRINTS | PR01217 | Proline rich extensin signature | 31 | 48 | 4.1E-14 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 13 | 29 | 4.1E-14 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 31 | 48 | 4.1E-14 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 13 | 29 | 4.1E-14 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 51 | 76 | 4.1E-14 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 51 | 76 | 4.1E-14 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 679 | 723 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 679 | 700 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 834 | 856 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 679 | 700 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 679 | 723 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 205 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 834 | 856 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 877 | 895 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 896 | 928 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 274 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1276 | 1310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 877 | 895 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1276 | 1310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 834 | 928 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 319 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 834 | 928 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 896 | 928 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24550.1 | proline extensin-like receptor kinase 1. encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection. | 0 |
| RefSeq | XP_006451164.1 | proline-rich receptor-like protein kinase PERK1 [Citrus clementina] | 0 |
| Q9LV48 | Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7G2ESF6 | (thale cress) hypothetical protein OS=Arabidopsis thaliana OX=3702 GN=AT9943_LOCUS11956 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology