Basic Information
Locus ID:
Lb4G22330
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 31917197 | 31919286 | - | Lb4G22330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.81 | 21,022.84 Da | 42.02 | 101.66 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 114 | 175 | 1.4E-9 | IPR041147 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 1 | 33 | 1.1E-6 | IPR011682 |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 114 | 175 | 1.4E-9 | IPR041147 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 1 | 33 | 1.1E-6 | IPR011682 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 1 | 176 | 8.63E-34 | IPR011013 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 1 | 176 | 8.63E-34 | IPR011013 |
| Gene3D | G3DSA:2.70.98.30 | - | 1 | 82 | 4.2E-24 | - |
| Gene3D | G3DSA:2.60.40.1360 | - | 109 | 154 | 4.6E-6 | - |
| Gene3D | G3DSA:2.70.98.30 | - | 1 | 82 | 4.2E-24 | - |
| Gene3D | G3DSA:2.60.40.1360 | - | 109 | 154 | 4.6E-6 | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26720.2 | Glycosyl hydrolase family 38 protein. | 0 |
| RefSeq | XP_022774192.1 | alpha-mannosidase At3g26720-like isoform X2 [Durio zibethinus] | 0 |
| P94078 | Alpha-mannosidase At3g26720 OS=Arabidopsis thaliana OX=3702 GN=At3g26720 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P6BAR9 | Alpha-mannosidase OS=Durio zibethinus OX=66656 GN=LOC111316506 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology