Basic Information
Locus ID:
Lb4G22327
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 31864720 | 31867699 | + | Lb4G22327 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 98,076.15 Da | 35.22 | 104.24 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 676 | 854 | 3.6E-31 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 67 | 126 | 3.9E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 67 | 126 | 3.9E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 676 | 854 | 3.6E-31 | IPR000719 |
| SUPERFAMILY | SSF52047 | RNI-like | 56 | 340 | 4.08E-48 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 414 | 555 | 4.31E-15 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 56 | 340 | 4.08E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 654 | 857 | 8.77E-61 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 654 | 857 | 8.77E-61 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 414 | 555 | 4.31E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 235 | 373 | 4.7E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 740 | 904 | 3.2E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 374 | 569 | 4.4E-26 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 636 | 739 | 9.9E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 130 | 234 | 1.8E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 235 | 373 | 4.7E-19 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 740 | 904 | 3.2E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 129 | 1.7E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 636 | 739 | 9.9E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 130 | 234 | 1.8E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 374 | 569 | 4.4E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 129 | 1.7E-28 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 200 | 224 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 65 | 89 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 516 | 540 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 113 | 136 | 9.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 200 | 224 | 300.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 113 | 136 | 9.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 516 | 540 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 65 | 89 | 170.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 673 | 899 | 1.5E-17 | IPR000719 |
| SMART | SM00220 | serkin_6 | 673 | 899 | 1.5E-17 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 673 | 904 | 29.898369 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 115 | 136 | 7.21911 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 673 | 904 | 29.898369 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 115 | 136 | 7.21911 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 679 | 701 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 679 | 701 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 774 | 786 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 774 | 786 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_021762442.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Chenopodium quinoa] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MZH7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology