Basic Information
Locus ID:
Lb4G22097
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 23215660 | 23217553 | - | Lb4G22097 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 65,438.15 Da | 54.98 | 62.18 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00564 | PB1 domain | 163 | 230 | 3.6E-12 | IPR000270 |
| Pfam | PF00564 | PB1 domain | 163 | 230 | 3.6E-12 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 164 | 234 | 4.51E-11 | - |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 164 | 234 | 4.51E-11 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 157 | 229 | 1.4E-5 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 157 | 229 | 1.4E-5 | - |
| SMART | SM00666 | PB1_new | 135 | 231 | 4.6E-12 | IPR000270 |
| SMART | SM00666 | PB1_new | 135 | 231 | 4.6E-12 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 445 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 497 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 445 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 497 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 322 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_024030168.1 | uncharacterized protein LOC21401480 [Morus notabilis] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P5BJY6 | Mitogen-activated protein kinase kinase kinase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_232570 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology