Basic Information
Locus ID:
Lb4G22096
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 23208938 | 23215559 | - | Lb4G22096 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.23 | 67,048.44 Da | 48.00 | 71.89 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 325 | 582 | 7.91678E-117 | - |
| CDD | cd13999 | STKc_MAP3K-like | 325 | 582 | 7.91678E-117 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 321 | 582 | 4.4E-63 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 321 | 582 | 4.4E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 308 | 581 | 1.62E-78 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 308 | 581 | 1.62E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 312 | 406 | 2.5E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 312 | 406 | 2.5E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 407 | 601 | 5.8E-54 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 407 | 601 | 5.8E-54 | - |
| SMART | SM00220 | serkin_6 | 319 | 585 | 6.4E-59 | IPR000719 |
| SMART | SM00220 | serkin_6 | 319 | 585 | 6.4E-59 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 319 | 584 | 41.120766 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 319 | 584 | 41.120766 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 325 | 350 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 444 | 456 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 325 | 350 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 444 | 456 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 553 | 575 | 1.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 438 | 456 | 1.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 509 | 531 | 1.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 438 | 456 | 1.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 553 | 575 | 1.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 509 | 531 | 1.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 401 | 414 | 1.8E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 401 | 414 | 1.8E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35050.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_050260864.1 | uncharacterized protein LOC126705736 [Quercus robur] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A314UYU7 | Protein kinase domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_28480 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology