Basic Information
Locus ID:
Lb4G22092
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ and MATH domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 22957565 | 22961141 | - | Lb4G22092 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 42,075.53 Da | 42.18 | 83.89 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 71 | 203 | 3.80484E-25 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 230 | 344 | 1.9202E-44 | - |
| CDD | cd18280 | BTB_POZ_BPM_plant | 230 | 344 | 1.9202E-44 | - |
| CDD | cd00121 | MATH | 71 | 203 | 3.80484E-25 | IPR002083 |
| Pfam | PF00917 | MATH domain | 92 | 204 | 6.0E-4 | IPR002083 |
| Pfam | PF00917 | MATH domain | 92 | 204 | 6.0E-4 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 230 | 346 | 1.7E-22 | IPR000210 |
| Pfam | PF00651 | BTB/POZ domain | 230 | 346 | 1.7E-22 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 68 | 210 | 2.29E-33 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 219 | 345 | 1.92E-24 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 219 | 345 | 1.92E-24 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 68 | 210 | 2.29E-33 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 71 | 208 | 2.5E-29 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 209 | 365 | 6.2E-31 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 71 | 208 | 2.5E-29 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 209 | 365 | 6.2E-31 | IPR011333 |
| SMART | SM00225 | BTB_4 | 240 | 348 | 7.9E-21 | IPR000210 |
| SMART | SM00061 | math_3 | 75 | 186 | 7.3E-6 | IPR002083 |
| SMART | SM00225 | BTB_4 | 240 | 348 | 7.9E-21 | IPR000210 |
| SMART | SM00061 | math_3 | 75 | 186 | 7.3E-6 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 240 | 303 | 17.41729 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 70 | 203 | 21.311443 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 70 | 203 | 21.311443 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 240 | 303 | 17.41729 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 17 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39760.2 | BTB/POZ/MATH-domains containing protein. | 0 |
| RefSeq | XP_034704587.1 | BTB/POZ and MATH domain-containing protein 3 isoform X2 [Vitis riparia] | 0 |
| O22286 | BTB/POZ and MATH domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=BPM3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7AP64 | Putative BTB/POZ and MATH domain-containing protein 3 isoform X1 OS=Davidia involucrata OX=16924 GN=Din_027595 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology