Basic Information
Locus ID:
Lb4G21937
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 17695691 | 17698014 | + | Lb4G21937 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.62 | 40,749.86 Da | 41.06 | 82.02 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 85 | 319 | 5.5E-38 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 85 | 319 | 5.5E-38 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 86 | 320 | 9.07E-60 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 86 | 320 | 9.07E-60 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 56 | 126 | 5.9E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 334 | 1.3E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 334 | 1.3E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 56 | 126 | 5.9E-15 | - |
| SMART | SM00220 | serkin_6 | 48 | 319 | 5.3E-13 | IPR000719 |
| SMART | SM00220 | serkin_6 | 48 | 319 | 5.3E-13 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 11 | 324 | 29.813566 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 11 | 324 | 29.813566 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 173 | 185 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 173 | 185 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 367 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 367 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56720.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_027160649.1 | probable receptor-like protein kinase At2g42960 isoform X1 [Coffea eugenioides] | 0 |
| Q8LEB6 | Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9AYP2 | Receptor protein serine/threonine kinase (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology