Basic Information
Locus ID:
Lb4G21852
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 14415711 | 14423428 | - | Lb4G21852 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.46 | 32,406.63 Da | 54.86 | 76.60 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14415 | UBA_NACA_NACP1 | 248 | 293 | 1.40059E-20 | - |
| CDD | cd14415 | UBA_NACA_NACP1 | 248 | 293 | 1.40059E-20 | - |
| Pfam | PF19026 | HYPK UBA domain | 254 | 293 | 4.8E-12 | IPR044034 |
| Pfam | PF01849 | NAC domain | 156 | 211 | 4.8E-22 | IPR002715 |
| Pfam | PF01849 | NAC domain | 156 | 211 | 4.8E-22 | IPR002715 |
| Pfam | PF19026 | HYPK UBA domain | 254 | 293 | 4.8E-12 | IPR044034 |
| Gene3D | G3DSA:2.20.70.30 | - | 162 | 215 | 6.3E-31 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 255 | 292 | 5.0E-19 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 255 | 292 | 5.0E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 162 | 215 | 6.3E-31 | IPR038187 |
| SMART | SM01407 | NAC_2 | 156 | 212 | 3.4E-26 | IPR002715 |
| SMART | SM01407 | NAC_2 | 156 | 212 | 3.4E-26 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 153 | 218 | 17.762043 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 153 | 218 | 17.762043 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 165 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 163 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 142 | 163 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 227 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 110 | 165 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_020241973.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Asparagus officinalis] | 0 |
| Q9LHG9 | Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J4ZNN6 | NAC-A/B domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_013524 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology