Basic Information
Locus ID:
Lb4G21718
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
NEK1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr04 | 9364800 | 9370082 | - | Lb4G21718 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.60 | 71,012.12 Da | 53.66 | 72.79 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08215 | STKc_Nek | 33 | 288 | 2.9944E-134 | - |
| CDD | cd08215 | STKc_Nek | 33 | 288 | 2.9944E-134 | - |
| Pfam | PF00069 | Protein kinase domain | 34 | 287 | 1.2E-62 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 34 | 287 | 1.2E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 31 | 289 | 2.43E-80 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 31 | 289 | 2.43E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 114 | 306 | 3.6E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 113 | 1.7E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 114 | 306 | 3.6E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 11 | 113 | 1.7E-23 | - |
| SMART | SM00220 | serkin_6 | 34 | 288 | 7.2E-80 | IPR000719 |
| SMART | SM00220 | serkin_6 | 34 | 288 | 7.2E-80 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 34 | 288 | 45.290295 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 34 | 288 | 45.290295 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 155 | 167 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 155 | 167 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 40 | 63 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 40 | 63 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 568 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 441 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 568 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 387 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 530 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 441 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 510 | 530 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 387 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04810.1 | NIMA-related kinase 2. Encodes AtNek2, a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes. | 0 |
| RefSeq | XP_021857265.1 | serine/threonine-protein kinase Nek3-like [Spinacia oleracea] | 0 |
| Q9CAU7 | Serine/threonine-protein kinase Nek2 OS=Arabidopsis thaliana OX=3702 GN=NEK2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RYR2 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_013760 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology