Basic Information
Locus ID:
Lb3G21417
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Hsp90 protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 402573886 | 402579261 | + | Lb3G21417 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.90 | 84,009.72 Da | 47.38 | 81.64 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 64 | 260 | 5.60998E-100 | - |
| CDD | cd16927 | HATPase_Hsp90-like | 64 | 260 | 5.60998E-100 | - |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 78 | 237 | 1.5E-12 | IPR003594 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 78 | 237 | 1.5E-12 | IPR003594 |
| Pfam | PF00183 | Hsp90 protein | 262 | 670 | 1.7E-167 | IPR001404 |
| Pfam | PF00183 | Hsp90 protein | 262 | 670 | 1.7E-167 | IPR001404 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 55 | 261 | 1.05E-58 | IPR036890 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 576 | 663 | 1.57E-24 | IPR037196 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 576 | 663 | 1.57E-24 | IPR037196 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 296 | 554 | 1.37E-89 | IPR020568 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 296 | 554 | 1.37E-89 | IPR020568 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 55 | 261 | 1.05E-58 | IPR036890 |
| Gene3D | G3DSA:3.30.565.10 | - | 42 | 284 | 2.6E-82 | IPR036890 |
| Gene3D | G3DSA:3.30.565.10 | - | 42 | 284 | 2.6E-82 | IPR036890 |
| Gene3D | G3DSA:1.20.120.790 | - | 554 | 685 | 2.1E-39 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 467 | 553 | 1.9E-31 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 294 | 466 | 7.3E-75 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 554 | 685 | 2.1E-39 | IPR037196 |
| Gene3D | G3DSA:3.40.50.11260 | - | 467 | 553 | 1.9E-31 | - |
| Gene3D | G3DSA:3.30.230.80 | - | 294 | 466 | 7.3E-75 | - |
| SMART | SM00387 | HKATPase_4 | 77 | 239 | 1.6E-6 | IPR003594 |
| SMART | SM00387 | HKATPase_4 | 77 | 239 | 1.6E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 22 | 686 | 2.5E-224 | IPR001404 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 22 | 686 | 2.5E-224 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 75 | 84 | - | IPR019805 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 75 | 84 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 125 | 142 | 8.4E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 76 | 98 | 8.4E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 55 | 75 | 8.4E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 55 | 75 | 8.4E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 246 | 264 | 8.4E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 227 | 244 | 8.4E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 246 | 264 | 8.4E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 143 | 160 | 8.4E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 172 | 194 | 8.4E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 227 | 244 | 8.4E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 76 | 98 | 8.4E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 172 | 194 | 8.4E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 143 | 160 | 8.4E-60 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 125 | 142 | 8.4E-60 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 52 | 711 | 25.209206 | IPR001404 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 52 | 711 | 25.209206 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 712 | 727 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 698 | 739 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 698 | 739 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 712 | 727 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_010261402.1 | PREDICTED: heat shock protein 90-5, chloroplastic-like [Nelumbo nucifera] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8A4S9 | heat shock protein 90-5, chloroplastic-like OS=Nelumbo nucifera OX=4432 GN=LOC104600243 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology