Basic Information
Locus ID:
Lb3G21290
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 394190747 | 394192706 | + | Lb3G21290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 17,521.34 Da | 42.19 | 80.48 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 166 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 119 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 166 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44530.4 | - | 0 |
| RefSeq | XP_021845479.1 | protein HIRA isoform X2 [Spinacia oleracea] | 0 |
| Q32SG6 | Protein HIRA OS=Zea mays OX=4577 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J7GBG0 | Protein HIRA OS=Camellia sinensis OX=4442 GN=HYC85_025141 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg35990 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_5683 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah028945 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g176310 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg26966, Sbi_jg33583 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg8293 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00002956 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl73291, Sgl76811 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000005535, gene:ENSEOMG00000037467 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7AG0000710, CQ.Regalona.r1.9BG0005040 |
| Apiaceae | Apium graveolens | 1 | Ag10G01626 |
| Arecaceae | Cocos nucifera | 1 | scaffold002569G000030 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103715391, gene-LOC103720567 |
| Asteraceae | Flaveria trinervia | 1 | Ftri16G08815 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G44530.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10010089m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 3 | Sp5g16690.v2.2, Sp5g16710.v2.2, Sp5g16720.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB06g025050.2N, BniB08g057540.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G1787 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G1778 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g00130 |
| Dunaliellaceae | Dunaliella salina | 3 | Dusal.0011s00004.v1.0, Dusal.0157s00001.v1.0 ... |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g02460 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-2361, nbisL1-mrna-467 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG09.708 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00015824 |
| Plumbaginaceae | Limonium bicolor | 4 | Lb3G19609, Lb3G21286, Lb3G21290, Lb3G21291 |
| Poaceae | Echinochloa crus-galli | 8 | AH02.360, AH03.1101, BH02.385, BH03.1260, CH02.424, CH02.428 ... |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0525380, gene-QOZ80_6BG0479030 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0332230.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_006918 |
| Poaceae | Oryza coarctata | 2 | Oco17G012100, Oco18G012080 |
| Poaceae | Oryza sativa | 1 | LOC_Os09g39420.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G131500, gene-BS78_03G035000 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0700488, Pt_Chr0700549 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr10G005640, Chr11G013650, Chr14G008450, Chr21G008630 |
| Poaceae | Thinopyrum elongatum | 2 | Tel3E01G695600, Tel4E01G024500 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC3AG026660, gene_TRIDC4AG046540 ... |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G304500.1, TraesCS4B02G006700.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb121570_P001, Zm00001eb307860_P005 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-31837, nbis-gene-45758, nbis-gene-53388 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g29855, Zma_g32044 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG03.1809, evm.TU.LG14.72 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g00220 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_12_RagTag.563 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-24174 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-14403 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-19863 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000027l.224 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00018263 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-5760 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-12039 |
| Salicaceae | Populus euphratica | 2 | populus_peu08597, populus_peu36737 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132600574 |
| Solanaceae | Solanum chilense | 1 | SOLCI000751500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107004876 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_13478 |
| Tamaricaceae | Tamarix chinensis | 1 | TC01G4388 |
| Zosteraceae | Zostera marina | 1 | Zosma03g17260.v3.1 |