Basic Information
Locus ID:
Lb3G21248
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 392093585 | 392102663 | - | Lb3G21248 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 137,762.34 Da | 40.86 | 74.17 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08154 | catalase_clade_1 | 757 | 1198 | 0.0 | - |
| CDD | cd08154 | catalase_clade_1 | 757 | 1198 | 0.0 | - |
| Pfam | PF00199 | Catalase | 759 | 1106 | 1.2E-156 | IPR011614 |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 569 | 682 | 1.3E-31 | IPR013103 |
| Pfam | PF06628 | Catalase-related immune-responsive | 1139 | 1201 | 4.0E-14 | IPR010582 |
| Pfam | PF14244 | gag-polypeptide of LTR copia-type | 27 | 71 | 8.1E-7 | IPR029472 |
| Pfam | PF06628 | Catalase-related immune-responsive | 1139 | 1201 | 4.0E-14 | IPR010582 |
| Pfam | PF07727 | Reverse transcriptase (RNA-dependent DNA polymerase) | 569 | 682 | 1.3E-31 | IPR013103 |
| Pfam | PF14244 | gag-polypeptide of LTR copia-type | 27 | 71 | 8.1E-7 | IPR029472 |
| Pfam | PF00199 | Catalase | 759 | 1106 | 1.2E-156 | IPR011614 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 568 | 666 | 1.96E-8 | IPR043502 |
| SUPERFAMILY | SSF56634 | Heme-dependent catalase-like | 752 | 1202 | 3.66E-187 | IPR020835 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 568 | 666 | 1.96E-8 | IPR043502 |
| SUPERFAMILY | SSF56634 | Heme-dependent catalase-like | 752 | 1202 | 3.66E-187 | IPR020835 |
| Gene3D | G3DSA:2.40.180.10 | Catalase core domain | 756 | 1203 | 1.2E-182 | - |
| Gene3D | G3DSA:2.40.180.10 | Catalase core domain | 756 | 1203 | 1.2E-182 | - |
| SMART | SM01060 | Catalase_2 | 759 | 1136 | 3.3E-223 | IPR011614 |
| SMART | SM01060 | Catalase_2 | 759 | 1136 | 3.3E-223 | IPR011614 |
| ProSiteProfiles | PS51402 | catalase family profile. | 755 | 1203 | 68.746445 | IPR018028 |
| ProSiteProfiles | PS51402 | catalase family profile. | 755 | 1203 | 68.746445 | IPR018028 |
| ProSitePatterns | PS00437 | Catalase proximal heme-ligand signature. | 1078 | 1086 | - | IPR002226 |
| ProSitePatterns | PS00438 | Catalase proximal active site signature. | 795 | 811 | - | IPR024708 |
| ProSitePatterns | PS00437 | Catalase proximal heme-ligand signature. | 1078 | 1086 | - | IPR002226 |
| ProSitePatterns | PS00438 | Catalase proximal active site signature. | 795 | 811 | - | IPR024708 |
| PRINTS | PR00067 | Catalase signature | 835 | 853 | 2.3E-59 | IPR018028 |
| PRINTS | PR00067 | Catalase signature | 1033 | 1060 | 2.3E-59 | IPR018028 |
| PRINTS | PR00067 | Catalase signature | 1065 | 1091 | 2.3E-59 | IPR018028 |
| PRINTS | PR00067 | Catalase signature | 1033 | 1060 | 2.3E-59 | IPR018028 |
| PRINTS | PR00067 | Catalase signature | 1065 | 1091 | 2.3E-59 | IPR018028 |
| PRINTS | PR00067 | Catalase signature | 835 | 853 | 2.3E-59 | IPR018028 |
| PRINTS | PR00067 | Catalase signature | 856 | 873 | 2.3E-59 | IPR018028 |
| PRINTS | PR00067 | Catalase signature | 856 | 873 | 2.3E-59 | IPR018028 |
| PRINTS | PR00067 | Catalase signature | 772 | 795 | 2.3E-59 | IPR018028 |
| PRINTS | PR00067 | Catalase signature | 772 | 795 | 2.3E-59 | IPR018028 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 294 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 294 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Pathway:
ko00380 (Tryptophan metabolism)
map00380 (Tryptophan metabolism)
ko00630 (Glyoxylate and dicarboxylate metabolism)
map00630 (Glyoxylate and dicarboxylate metabolism)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko04011 (MAPK signaling pathway - yeast)
map04011 (MAPK signaling pathway - yeast)
ko04016 (MAPK signaling pathway - plant)
map04016 (MAPK signaling pathway - plant)
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04146 (Peroxisome)
map04146 (Peroxisome)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04212 (Longevity regulating pathway - worm)
map04212 (Longevity regulating pathway - worm)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G35090.1 | catalase 2. Encodes a peroxisomal catalase, highly expressed in bolts and leaves. mRNA expression patterns show circadian regulation with mRNA levels being high in the subjective early morning. Loss of function mutations have increased H2O2 levels and increased H2O2 sensitivity. Mutants accumulate more toxic ions yet show decreased sensitivity to Li+. This decreased sensitivity is most likely due to an insensitivity to ethylene. Note that in Queval et al. (2007) Plant Journal, 52(4):640, SALK_057998 is named as cat2-1, SALK_076998 is named as cat2-2; in Bueso et al. (2007) Plant Journal, 52(6):1052, SALK_076998 is named as cat2-1. TAIR has adopted the nomenclature consistent with that in Bueso et al. (2007) after consultation with the authors: SALK_076998 (cat2-1), SALK_057998 (cat2-2). | 0 |
| RefSeq | XP_028210269.1 | catalase-1/2 [Glycine soja] | 0 |
| P29756 | Catalase-1/2 OS=Glycine max OX=3847 GN=CAT1 PE=2 SV=1 | 0 | |
| TrEMBL | O81336 | Catalase OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology