Basic Information
Locus ID:
Lb3G21219
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Thioredoxin-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 390335815 | 390342418 | + | Lb3G21219 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 83,482.23 Da | 50.02 | 80.16 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 16 | 177 | 3.7081E-44 | - |
| CDD | cd01989 | STK_N | 16 | 177 | 3.7081E-44 | - |
| Pfam | PF00582 | Universal stress protein family | 15 | 135 | 7.8E-6 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 436 | 693 | 1.0E-38 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 15 | 135 | 7.8E-6 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 436 | 693 | 1.0E-38 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 15 | 142 | 4.6E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 413 | 698 | 1.75E-65 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 413 | 698 | 1.75E-65 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 15 | 142 | 4.6E-6 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 412 | 508 | 1.5E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 509 | 706 | 6.6E-45 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 14 | 149 | 1.2E-8 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 509 | 706 | 6.6E-45 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 14 | 149 | 1.2E-8 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 412 | 508 | 1.5E-25 | - |
| SMART | SM00220 | serkin_6 | 434 | 703 | 2.8E-27 | IPR000719 |
| SMART | SM00220 | serkin_6 | 434 | 703 | 2.8E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 434 | 703 | 34.604992 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 434 | 703 | 34.604992 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 555 | 567 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 555 | 567 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 266 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 266 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 310 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 310 | - | - |
| Coils | Coil | Coil | 310 | 334 | - | - |
| Coils | Coil | Coil | 366 | 407 | - | - |
| Coils | Coil | Coil | 310 | 334 | - | - |
| Coils | Coil | Coil | 366 | 407 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_017983400.1 | PREDICTED: U-box domain-containing protein 35 isoform X4 [Theobroma cacao] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J5AZM1 | Protein kinase domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_030816 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology