HalophFGD

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Basic Information
Locus ID: Lb3G20948
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: ribonuclease H protein
Maps and Mapping Data
Chromosome Start End Strand ID
chr03 372158279 372160168 + Lb3G20948
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.26 43,805.62 Da 44.88 91.39 0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF14111 Domain of unknown function (DUF4283) 64 200 6.7E-16 IPR025558
Pfam PF14111 Domain of unknown function (DUF4283) 64 200 6.7E-16 IPR025558
Best hit
Source Best Hit ID Description E-value
RefSeq XP_023918126.1 uncharacterized protein LOC112029670 [Quercus suber] 0
TrEMBL A0A5C7HA63 CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019369 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-2734
Plumbaginaceae Limonium bicolor 90 Lb0G36861, Lb0G36915, Lb0G37393, Lb0G37441, Lb0G37645 ...
Lb0G37943, Lb0G38106, Lb0G38123, Lb1G00247, Lb1G01449, Lb1G01710, Lb1G01806, Lb1G01860, Lb1G02159, Lb1G02317, Lb1G02384, Lb1G05943, Lb1G06245, Lb2G08303, Lb2G08431, Lb2G08930, Lb2G08938, Lb2G08972, Lb2G09582, Lb2G09600, Lb2G09662, Lb2G09670, Lb2G09672, Lb2G09898, Lb2G10709, Lb2G11736, Lb2G11738, Lb2G11978, Lb2G12177, Lb2G12223, Lb2G12325, Lb2G12798, Lb2G12820, Lb2G13243, Lb2G13279, Lb2G13810, Lb2G14137, Lb2G14314, Lb2G15092, Lb3G16104, Lb3G16150, Lb3G17709, Lb3G17719, Lb3G18507, Lb3G18527, Lb3G18899, Lb3G19608, Lb3G20088, Lb3G20791, Lb3G20948, Lb3G21267, Lb3G21394, Lb4G21555, Lb4G21796, Lb4G22022, Lb4G22264, Lb4G22658, Lb4G22755, Lb4G22758, Lb4G23752, Lb4G24009, Lb4G24443, Lb4G24452, Lb4G24647, Lb4G25049, Lb4G25361, Lb4G25656, Lb4G25797, Lb4G26332, Lb5G26690, Lb5G27630, Lb5G28672, Lb6G30159, Lb6G30724, Lb6G31187, Lb6G31394, Lb7G33042, Lb7G33045, Lb7G33400, Lb7G33966, Lb7G35179, Lb7G35191, Lb7G35522, Lb8G35809, Lb8G36652
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.