Basic Information
Locus ID:
Lb3G20843
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 367970249 | 367974400 | + | Lb3G20843 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 90,561.70 Da | 31.22 | 101.37 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 59 | 1.3E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 492 | 535 | 4.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 138 | 197 | 3.4E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 715 | 791 | 3.1E-10 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 138 | 197 | 3.4E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 715 | 791 | 3.1E-10 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 20 | 59 | 1.3E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 492 | 535 | 4.0E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 265 | 590 | 1.33E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 307 | 2.45E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 672 | 799 | 4.62E-22 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 672 | 799 | 4.62E-22 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 265 | 590 | 1.33E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 43 | 307 | 2.45E-47 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 181 | 1.2E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 259 | 1.7E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 19 | 181 | 1.2E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 188 | 259 | 1.7E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 260 | 617 | 1.5E-95 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 698 | 824 | 5.0E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 698 | 824 | 5.0E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 260 | 617 | 1.5E-95 | IPR032675 |
| SMART | SM00220 | serkin_6 | 653 | 818 | 0.001 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 498 | 521 | 8.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 137 | 160 | 8.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 283 | 307 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 522 | 546 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 234 | 258 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 137 | 160 | 8.6 | IPR003591 |
| SMART | SM00220 | serkin_6 | 653 | 818 | 0.001 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 234 | 258 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 498 | 521 | 8.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 283 | 307 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 522 | 546 | 31.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 561 | 824 | 9.912894 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 561 | 824 | 9.912894 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_027105394.1 | receptor-like protein kinase HSL1 [Coffea arabica] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P6VQQ4 | receptor-like protein kinase HSL1 OS=Coffea arabica OX=13443 GN=LOC113726078 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology