Basic Information
Locus ID:
Lb3G20824
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 366859416 | 366862866 | + | Lb3G20824 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.85 | 59,257.25 Da | 41.94 | 81.65 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 194 | 460 | 2.65537E-108 | - |
| CDD | cd14066 | STKc_IRAK | 194 | 460 | 2.65537E-108 | - |
| Pfam | PF00069 | Protein kinase domain | 189 | 457 | 2.5E-48 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 189 | 457 | 2.5E-48 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 164 | 461 | 1.35E-79 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 164 | 461 | 1.35E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 169 | 263 | 9.2E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 264 | 471 | 4.5E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 264 | 471 | 4.5E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 169 | 263 | 9.2E-34 | - |
| SMART | SM00220 | serkin_6 | 188 | 459 | 1.7E-36 | IPR000719 |
| SMART | SM00220 | serkin_6 | 188 | 459 | 1.7E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 188 | 465 | 38.520111 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 188 | 465 | 38.520111 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 194 | 216 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 310 | 322 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 310 | 322 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 194 | 216 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 154 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 496 | 532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 154 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02630.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034675632.1 | probable serine/threonine-protein kinase At1g01540 isoform X2 [Vitis riparia] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | F6H1C1 | Protein kinase domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g10310 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology