Basic Information
Locus ID:
Lb3G20663
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 352355076 | 352363019 | - | Lb3G20663 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 96,600.75 Da | 44.93 | 75.53 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 590 | 850 | 9.07741E-113 | - |
| CDD | cd13999 | STKc_MAP3K-like | 590 | 850 | 9.07741E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 586 | 850 | 2.6E-60 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 6 | 56 | 3.3E-9 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 586 | 850 | 2.6E-60 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 6 | 56 | 3.3E-9 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 4 | 61 | 2.94E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 571 | 849 | 2.6E-75 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 4 | 61 | 2.94E-8 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 571 | 849 | 2.6E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 577 | 671 | 4.3E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 672 | 868 | 3.1E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 577 | 671 | 4.3E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 672 | 868 | 3.1E-53 | - |
| SMART | SM00220 | serkin_6 | 584 | 854 | 1.2E-54 | IPR000719 |
| SMART | SM00220 | serkin_6 | 584 | 854 | 1.2E-54 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 584 | 853 | 40.71088 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 584 | 853 | 40.71088 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 710 | 722 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 590 | 615 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 710 | 722 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 590 | 615 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 777 | 799 | 3.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 821 | 843 | 3.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 704 | 722 | 3.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 666 | 679 | 3.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 666 | 679 | 3.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 777 | 799 | 3.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 704 | 722 | 3.3E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 821 | 843 | 3.3E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 533 | 547 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 549 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 549 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 280 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 533 | 547 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 280 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16270.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_010693405.1 | uncharacterized protein LOC104906362 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9EDJ9 | Dual-specificity kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology