Basic Information
Locus ID:
Lb3G20631
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 349962211 | 349983314 | + | Lb3G20631 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 85,821.05 Da | 65.11 | 74.03 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 703 | 742 | 2.21387E-20 | - |
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 703 | 742 | 2.21387E-20 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 700 | 747 | 1.9E-11 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 700 | 747 | 1.9E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 702 | 748 | 8.83E-7 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 702 | 748 | 8.83E-7 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 681 | 753 | 5.3E-14 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 681 | 753 | 5.3E-14 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 703 | 742 | 10.689412 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 703 | 742 | 10.689412 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 598 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 217 | 239 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 187 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 418 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 598 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 607 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 607 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 51 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G04460.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_048325870.1 | uncharacterized protein LOC107413267 isoform X2 [Ziziphus jujuba var. spinosa] | 0 |
| TrEMBL | A0A5B6Z7T1 | RING-type domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_009693 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology