Basic Information
Locus ID:
Lb3G20571
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 342940851 | 342943458 | + | Lb3G20571 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 88,058.97 Da | 36.57 | 112.52 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 146 | 168 | 0.32 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 146 | 168 | 0.32 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 435 | 451 | 0.59 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 435 | 451 | 0.59 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 481 | 689 | 4.35E-45 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 481 | 689 | 4.35E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 749 | 822 | 3.58E-6 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 103 | 455 | 1.57E-65 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 103 | 455 | 1.57E-65 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 749 | 822 | 3.58E-6 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 227 | 469 | 3.8E-69 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 50 | 226 | 7.3E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 470 | 700 | 8.3E-61 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 470 | 700 | 8.3E-61 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 751 | 825 | 5.2E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 227 | 469 | 3.8E-69 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 751 | 825 | 5.2E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 50 | 226 | 7.3E-39 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 650 | 675 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 579 | 602 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 482 | 506 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 313 | 337 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 168 | 192 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 144 | 167 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 144 | 167 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 579 | 602 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 650 | 675 | 87.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 168 | 192 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 578 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 313 | 337 | 65.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 433 | 457 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 482 | 506 | 19.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 629 | 651 | 7.704254 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 629 | 651 | 7.704254 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 761 | 784 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 761 | 784 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 482 | 495 | 2.3E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 482 | 495 | 2.3E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 436 | 449 | 2.3E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 436 | 449 | 2.3E-6 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G48940.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_034201320.1 | receptor-like protein kinase 2 [Prunus dulcis] | 0 |
| C0LGV1 | LRR receptor-like serine/threonine-protein kinase RGI2 OS=Arabidopsis thaliana OX=3702 GN=RGI2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2N9EBA3 | Protein kinase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS4129 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000040486 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG06.740 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb0G37486, Lb3G20571 |
| Salicaceae | Populus euphratica | 1 | populus_peu34874 |