Basic Information
Locus ID:
Lb3G20365
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 323578214 | 323591102 | - | Lb3G20365 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 84,704.68 Da | 28.64 | 94.04 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11721 | Malectin domain | 399 | 571 | 3.4E-35 | IPR021720 |
| Pfam | PF13855 | Leucine rich repeat | 126 | 185 | 6.4E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 601 | 756 | 8.7E-36 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 399 | 571 | 3.4E-35 | IPR021720 |
| Pfam | PF13855 | Leucine rich repeat | 126 | 185 | 6.4E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 601 | 756 | 8.7E-36 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 333 | 1.36E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 583 | 762 | 5.66E-57 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 583 | 762 | 5.66E-57 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 66 | 333 | 1.36E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 259 | 377 | 2.4E-16 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 576 | 674 | 9.2E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 675 | 763 | 6.1E-25 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 258 | 2.1E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 56 | 188 | 2.6E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 675 | 763 | 6.1E-25 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 395 | 575 | 4.8E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 259 | 377 | 2.4E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 258 | 2.1E-11 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 576 | 674 | 9.2E-36 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 395 | 575 | 4.8E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 56 | 188 | 2.6E-34 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 292 | 316 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 148 | 171 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 148 | 171 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 172 | 195 | 1.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 172 | 195 | 1.5 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 292 | 316 | 43.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 599 | 757 | 1.2E-8 | IPR000719 |
| SMART | SM00220 | serkin_6 | 599 | 757 | 1.2E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 599 | 763 | 31.382439 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 599 | 763 | 31.382439 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 719 | 731 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 719 | 731 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G29750.3 | - | 0 |
| RefSeq | XP_028081410.1 | probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X4 [Camellia sinensis] | 0 |
| Q9FXF2 | Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana OX=3702 GN=RKF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5B7AZ85 | Putative LRR receptor-like serine/threonine-protein kinase RFK1 isoform X1 (Fragment) OS=Davidia involucrata OX=16924 GN=Din_030717 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology