Basic Information
Locus ID:
Lb3G20280
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 314094329 | 314098933 | - | Lb3G20280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 87,865.93 Da | 36.87 | 97.44 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 482 | 757 | 4.2E-41 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 482 | 757 | 4.2E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 465 | 762 | 2.02E-72 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 151 | 400 | 1.88E-38 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 235 | 9.69E-47 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 465 | 762 | 2.02E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 2 | 235 | 9.69E-47 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 151 | 400 | 1.88E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 570 | 787 | 5.8E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 150 | 5.3E-37 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 463 | 569 | 7.2E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 151 | 416 | 3.7E-64 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 570 | 787 | 5.8E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 151 | 416 | 3.7E-64 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 150 | 5.3E-37 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 463 | 569 | 7.2E-24 | - |
| SMART | SM00220 | serkin_6 | 480 | 766 | 8.4E-32 | IPR000719 |
| SMART | SM00220 | serkin_6 | 480 | 766 | 8.4E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 480 | 766 | 36.343475 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 480 | 766 | 36.343475 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 486 | 509 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 614 | 626 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 486 | 509 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 614 | 626 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 766 | 804 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 766 | 804 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 766 | 786 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 766 | 786 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_010260335.1 | PREDICTED: receptor-like protein kinase HSL1 [Nelumbo nucifera] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8A0D3 | receptor-like protein kinase HSL1 OS=Nelumbo nucifera OX=4432 GN=LOC104599478 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology