Basic Information
Locus ID:
Lb3G20221
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
BTB POZ domain-containing protein POB1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 306337019 | 306338802 | + | Lb3G20221 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.09 | 51,898.25 Da | 45.72 | 92.74 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 80 | 155 | 1.55758E-13 | - |
| CDD | cd18186 | BTB_POZ_ZBTB_KLHL-like | 80 | 155 | 1.55758E-13 | - |
| Pfam | PF00651 | BTB/POZ domain | 81 | 168 | 1.5E-13 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 197 | 268 | 1.8E-6 | IPR011705 |
| Pfam | PF00651 | BTB/POZ domain | 81 | 168 | 1.5E-13 | IPR000210 |
| Pfam | PF07707 | BTB And C-terminal Kelch | 197 | 268 | 1.8E-6 | IPR011705 |
| SUPERFAMILY | SSF54695 | POZ domain | 81 | 169 | 2.75E-13 | IPR011333 |
| SUPERFAMILY | SSF54695 | POZ domain | 81 | 169 | 2.75E-13 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 192 | 292 | 1.1E-5 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 192 | 292 | 1.1E-5 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 55 | 189 | 4.0E-18 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 55 | 189 | 4.0E-18 | IPR011333 |
| SMART | SM00875 | BACK_2 | 168 | 270 | 0.0045 | IPR011705 |
| SMART | SM00225 | BTB_4 | 75 | 172 | 1.6E-9 | IPR000210 |
| SMART | SM00225 | BTB_4 | 75 | 172 | 1.6E-9 | IPR000210 |
| SMART | SM00875 | BACK_2 | 168 | 270 | 0.0045 | IPR011705 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 57 | 140 | 13.074069 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 57 | 140 | 13.074069 | IPR000210 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G46260.1 | BTB/POZ/Kelch-associated protein. | 0 |
| RefSeq | XP_010925791.1 | BTB/POZ domain-containing protein POB1 isoform X2 [Elaeis guineensis] | 0 |
| O82343 | BTB/POZ domain-containing protein At2g46260 OS=Arabidopsis thaliana OX=3702 GN=At2g46260 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A4P8K8 | Putative chromatin remodeling & transcription regulator BTB-POZ family OS=Lupinus albus OX=3870 GN=Lal_00003989 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||