Basic Information
Locus ID:
Lb3G20124
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 298057138 | 298062364 | + | Lb3G20124 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 102,254.33 Da | 41.62 | 88.73 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 603 | 876 | 2.55369E-90 | - |
| CDD | cd14066 | STKc_IRAK | 603 | 876 | 2.55369E-90 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 338 | 377 | 0.27 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 74 | 0.0013 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 396 | 440 | 2.1E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 600 | 871 | 1.8E-45 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 101 | 160 | 8.5E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 396 | 440 | 2.1E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 338 | 377 | 0.27 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 101 | 160 | 8.5E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 39 | 74 | 0.0013 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 600 | 871 | 1.8E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 572 | 880 | 1.13E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 73 | 448 | 4.08E-50 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 73 | 448 | 4.08E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 572 | 880 | 1.13E-76 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 675 | 894 | 1.9E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 334 | 1.5E-73 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 558 | 674 | 8.9E-36 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 558 | 674 | 8.9E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 339 | 465 | 2.1E-31 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 675 | 894 | 1.9E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 334 | 1.5E-73 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 339 | 465 | 2.1E-31 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 403 | 426 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 427 | 449 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 147 | 172 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 123 | 146 | 0.015 | IPR003591 |
| SMART | SM00220 | serkin_6 | 597 | 877 | 5.3E-40 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 147 | 172 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 123 | 146 | 0.015 | IPR003591 |
| SMART | SM00220 | serkin_6 | 597 | 877 | 5.3E-40 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 403 | 426 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 427 | 449 | 18.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 102 | 124 | 7.065096 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 597 | 877 | 40.668476 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 102 | 124 | 7.065096 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 405 | 427 | 7.350022 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 149 | 170 | 7.180607 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 405 | 427 | 7.350022 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 149 | 170 | 7.180607 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 597 | 877 | 40.668476 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 722 | 734 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 722 | 734 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 603 | 625 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 603 | 625 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 465 | 486 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_011101591.1 | receptor-like kinase TMK4 [Sesamum indicum] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A1VLR2 | Putative receptor protein kinase TMK1 OS=Morella rubra OX=262757 GN=CJ030_MR5G023026 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology