Basic Information
Locus ID:
Lb3G20071
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
phosphatase 2A 55 kDa regulatory subunit B
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 292394668 | 292403789 | - | Lb3G20071 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 49,290.92 Da | 43.20 | 79.30 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 235 | 271 | 0.12 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 235 | 271 | 0.12 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 48 | 419 | 1.98E-32 | IPR036322 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 48 | 419 | 1.98E-32 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 45 | 205 | 1.4E-6 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 218 | 436 | 9.4E-16 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 218 | 436 | 9.4E-16 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 45 | 205 | 1.4E-6 | IPR015943 |
| SMART | SM00320 | WD40_4 | 40 | 75 | 5.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 341 | 379 | 83.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 282 | 322 | 9.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 40 | 75 | 5.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 282 | 322 | 9.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 232 | 271 | 1.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 232 | 271 | 1.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 113 | 153 | 9.3 | IPR001680 |
| SMART | SM00320 | WD40_4 | 341 | 379 | 83.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 113 | 153 | 9.3 | IPR001680 |
| PIRSF | PIRSF037309 | PPA2_B55 | 21 | 403 | 2.1E-154 | IPR000009 |
| PIRSF | PIRSF037309 | PPA2_B55 | 21 | 403 | 2.1E-154 | IPR000009 |
| ProSitePatterns | PS01025 | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 241 | 255 | - | IPR018067 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 113 | 127 | - | IPR018067 |
| ProSitePatterns | PS01025 | Protein phosphatase 2A regulatory subunit PR55 signature 2. | 241 | 255 | - | IPR018067 |
| ProSitePatterns | PS01024 | Protein phosphatase 2A regulatory subunit PR55 signature 1. | 113 | 127 | - | IPR018067 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 299 | 327 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 271 | 298 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 129 | 157 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 243 | 270 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 384 | 409 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 356 | 383 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 100 | 128 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 328 | 355 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 54 | 74 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 243 | 270 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 328 | 355 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 100 | 128 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 54 | 74 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 356 | 383 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 299 | 327 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 129 | 157 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 271 | 298 | 1.8E-119 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 384 | 409 | 1.8E-119 | IPR000009 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.1 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_010690054.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| A2X2K3 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform OS=Oryza sativa subsp. indica OX=39946 GN=OsI_006296 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7C9CS64 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B (Fragment) OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology