halophFGD

Basic Information

Locus ID: Lb3G19924

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: transposon protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr03	273365370	273383205	-	Lb3G19924

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.70	170,106.89 Da	41.62	77.72	-0.55

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13963	Transposase-associated domain	3	73	5.0E-15	IPR029480
Pfam	PF03732	Retrotransposon gag protein	1281	1377	3.9E-13	IPR005162
Pfam	PF02992	Transposase family tnp2	341	416	2.1E-15	IPR004242
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	1102	1199	1.6E-7	IPR003653
Pfam	PF13960	Domain of unknown function (DUF4218)	549	661	1.5E-39	IPR025452
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	1102	1199	1.6E-7	IPR003653
Pfam	PF02992	Transposase family tnp2	341	416	2.1E-15	IPR004242
Pfam	PF13960	Domain of unknown function (DUF4218)	549	661	1.5E-39	IPR025452
Pfam	PF03732	Retrotransposon gag protein	1281	1377	3.9E-13	IPR005162
Pfam	PF13963	Transposase-associated domain	3	73	5.0E-15	IPR029480
SUPERFAMILY	SSF54001	Cysteine proteinases	1108	1195	3.92E-13	IPR038765
SUPERFAMILY	SSF54001	Cysteine proteinases	1108	1195	3.92E-13	IPR038765
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	895	1215	7.6E-13	-
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	895	1215	7.6E-13	-
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	910	1190	9.194268	IPR003653
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	910	1190	9.194268	IPR003653
MobiDBLite	mobidb-lite	consensus disorder prediction	949	972	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	776	856	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1445	1459	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1445	1459	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	949	972	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	806	820	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1423	1444	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	776	856	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1411	1484	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1423	1444	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1411	1484	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	806	820	-	-

Gene Ontology

Biological Process:

GO:0006508 (proteolysis)

Molecular Function:

GO:0008234 (cysteine-type peptidase activity)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_031097890.1	uncharacterized protein LOC116002025 [Ipomoea triloba]	0
TrEMBL	A0A8T0LD44	Transposase OS=Phaseolus angularis OX=3914 GN=HKW66_Vig0005590 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl83028, Sgl83243
Asteraceae	Flaveria trinervia	1	Ftri11G21610
Plumbaginaceae	Limonium bicolor	205	Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... Lb1G00016, Lb1G00025, Lb1G00041, Lb1G00216, Lb1G00446, Lb1G00496, Lb1G00537, Lb1G00838, Lb1G00881, Lb1G01217, Lb1G01250, Lb1G01420, Lb1G01727, Lb1G01739, Lb1G01864, Lb1G02109, Lb1G02190, Lb1G02386, Lb1G02665, Lb1G02901, Lb1G04123, Lb1G04369, Lb1G04498, Lb1G04508, Lb1G04544, Lb1G04801, Lb1G04989, Lb1G05062, Lb1G05705, Lb1G06154, Lb1G06343, Lb1G06536, Lb1G07190, Lb1G07606, Lb1G08079, Lb1G08084, Lb2G08488, Lb2G08848, Lb2G09003, Lb2G09148, Lb2G09151, Lb2G09732, Lb2G10130, Lb2G10257, Lb2G10268, Lb2G10796, Lb2G11162, Lb2G11275, Lb2G11363, Lb2G11364, Lb2G11700, Lb2G11973, Lb2G12024, Lb2G12090, Lb2G12144, Lb2G12148, Lb2G12772, Lb2G14019, Lb2G14433, Lb2G14511, Lb2G14738, Lb2G14769, Lb2G14775, Lb2G14777, Lb2G14779, Lb2G14787, Lb2G14822, Lb2G14863, Lb2G15122, Lb3G15887, Lb3G15944, Lb3G16026, Lb3G16136, Lb3G16486, Lb3G16505, Lb3G16933, Lb3G16974, Lb3G18077, Lb3G18799, Lb3G19247, Lb3G19458, Lb3G19924, Lb3G20000, Lb3G20090, Lb3G20112, Lb3G20377, Lb3G21074, Lb3G21407, Lb4G21885, Lb4G22209, Lb4G22210, Lb4G22510, Lb4G23391, Lb4G23834, Lb4G24203, Lb4G24542, Lb4G24623, Lb4G24702, Lb4G25029, Lb4G25228, Lb4G25239, Lb4G25243, Lb4G25342, Lb4G25423, Lb4G25437, Lb4G25535, Lb4G25571, Lb4G26024, Lb4G26130, Lb4G26162, Lb4G26268, Lb4G26311, Lb4G26371, Lb5G26430, Lb5G26481, Lb5G26498, Lb5G26520, Lb5G26533, Lb5G26534, Lb5G26570, Lb5G26588, Lb5G26681, Lb5G26742, Lb5G26986, Lb5G26989, Lb5G27035, Lb5G27103, Lb5G27152, Lb5G27158, Lb5G27187, Lb5G27188, Lb5G27190, Lb5G27320, Lb5G27668, Lb5G28081, Lb5G28149, Lb5G28249, Lb5G28756, Lb5G28862, Lb5G29295, Lb5G29470, Lb5G29520, Lb5G29610, Lb6G29651, Lb6G30138, Lb6G30357, Lb6G30358, Lb6G30382, Lb6G30561, Lb6G30663, Lb6G30781, Lb6G30811, Lb6G30830, Lb6G30840, Lb6G30846, Lb6G30864, Lb6G30937, Lb6G31137, Lb6G31222, Lb6G31418, Lb6G31748, Lb6G31849, Lb6G32045, Lb6G32399, Lb6G32595, Lb7G32703, Lb7G32755, Lb7G32868, Lb7G33086, Lb7G33313, Lb7G33361, Lb7G33383, Lb7G33437, Lb7G33438, Lb7G33475, Lb7G33577, Lb7G33692, Lb7G33720, Lb7G34424, Lb7G34589, Lb7G34667, Lb7G34684, Lb7G34766, Lb7G34767, Lb7G34778, Lb7G34790, Lb7G35224, Lb7G35252, Lb7G35388, Lb7G35405, Lb7G35411, Lb7G35542, Lb7G35545, Lb8G35638, Lb8G35639, Lb8G35768, Lb8G35859, Lb8G35969, Lb8G36442, Lb8G36575
Poaceae	Lolium multiflorum	4	gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... gene-QYE76_070047