Basic Information
Locus ID:
Lb3G19716
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 253556006 | 253558861 | - | Lb3G19716 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.36 | 44,406.07 Da | 40.92 | 95.50 | 0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 201 | 331 | 1.5E-19 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 201 | 331 | 1.5E-19 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 189 | 332 | 2.75E-22 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 189 | 332 | 2.75E-22 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 37 | 139 | 1.02E-12 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 37 | 139 | 1.02E-12 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 32 | 182 | 1.6E-5 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 183 | 332 | 8.9E-17 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 183 | 332 | 8.9E-17 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 32 | 182 | 1.6E-5 | IPR036378 |
| SMART | SM00554 | fasc_3 | 227 | 332 | 4.7E-18 | IPR000782 |
| SMART | SM00554 | fasc_3 | 227 | 332 | 4.7E-18 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 189 | 329 | 16.878117 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 189 | 329 | 16.878117 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 361 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 384 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 384 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 361 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 340 | 401 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45470.1 | FASCICLIN-like arabinogalactan protein 8. | 0 |
| RefSeq | XP_002511740.1 | fasciclin-like arabinogalactan protein 10 [Ricinus communis] | 0 |
| O22126 | Fasciclin-like arabinogalactan protein 8 OS=Arabidopsis thaliana OX=3702 GN=FLA8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5B6ZGX4 | Putative fasciclin-like arabinogalactan protein 8 OS=Davidia involucrata OX=16924 GN=Din_013043 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology