Basic Information
Locus ID:
Lb3G19655
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
NHX1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 243759885 | 243763920 | - | Lb3G19655 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 60,871.76 Da | 39.30 | 104.78 | 0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 29 | 437 | 2.0E-57 | IPR006153 |
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 29 | 437 | 2.0E-57 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 143 | 195 | 1.3E-14 | - |
| Gene3D | G3DSA:6.10.140.1330 | - | 143 | 195 | 1.3E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 22 | 440 | 1.1E-77 | IPR004709 |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 22 | 440 | 1.1E-77 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 96 | 110 | 3.6E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 111 | 119 | 3.6E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 151 | 161 | 3.6E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 111 | 119 | 3.6E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 82 | 93 | 3.6E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 82 | 93 | 3.6E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 151 | 161 | 3.6E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 96 | 110 | 3.6E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 0 |
| RefSeq | XP_010672472.2 | sodium/hydrogen exchanger 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q56XP4 | Sodium/hydrogen exchanger 2 OS=Arabidopsis thaliana OX=3702 GN=NHX2 PE=2 SV=2 | 0 | |
| TrEMBL | B3VN41 | Na+/H+ antiporter protein OS=Limonium gmelinii OX=46094 GN=NHX1 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology