Basic Information
Locus ID:
Lb3G19304
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Small ubiquitinrelated modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 210560701 | 210562284 | - | Lb3G19304 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.71 | 15,083.25 Da | 41.42 | 78.58 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01763 | Ubl_SUMO_like | 13 | 81 | 4.87054E-17 | - |
| CDD | cd01763 | Ubl_SUMO_like | 13 | 81 | 4.87054E-17 | - |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 16 | 82 | 2.3E-8 | IPR022617 |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 16 | 82 | 2.3E-8 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 9 | 82 | 2.87E-13 | IPR029071 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 9 | 82 | 2.87E-13 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 2 | 85 | 1.9E-16 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 2 | 85 | 1.9E-16 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 14 | 90 | 8.807359 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 14 | 90 | 8.807359 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_011091451.1 | small ubiquitin-related modifier 1 [Sesamum indicum] | 0 |
| TrEMBL | A0A5B8MUA8 | Small ubiquitin-related modifier OS=Chloropicon primus OX=1764295 GN=A3770_10p58520 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||