halophFGD

Basic Information

Locus ID: Lb3G19247

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: source UniProtKB

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr03	207020479	207028890	+	Lb3G19247

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.94	154,234.30 Da	48.06	74.25	-0.60

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02992	Transposase family tnp2	299	509	2.5E-82	IPR004242
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	1184	1281	1.0E-13	IPR003653
Pfam	PF13963	Transposase-associated domain	5	73	5.5E-15	IPR029480
Pfam	PF02902	Ulp1 protease family, C-terminal catalytic domain	1184	1281	1.0E-13	IPR003653
Pfam	PF13963	Transposase-associated domain	5	73	5.5E-15	IPR029480
Pfam	PF02992	Transposase family tnp2	299	509	2.5E-82	IPR004242
SUPERFAMILY	SSF54001	Cysteine proteinases	1175	1282	1.08E-19	IPR038765
SUPERFAMILY	SSF54001	Cysteine proteinases	1175	1282	1.08E-19	IPR038765
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1147	1293	2.0E-18	-
Gene3D	G3DSA:3.40.395.10	Adenoviral Proteinase; Chain A	1147	1293	2.0E-18	-
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	1105	1278	10.885603	IPR003653
ProSiteProfiles	PS50600	Ubiquitin-like protease family profile.	1105	1278	10.885603	IPR003653
MobiDBLite	mobidb-lite	consensus disorder prediction	604	682	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	632	646	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	632	646	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	604	682	-	-
Coils	Coil	Coil	927	947	-	-
Coils	Coil	Coil	927	947	-	-

Gene Ontology

Biological Process:

GO:0006508 (proteolysis)

Molecular Function:

GO:0008234 (cysteine-type peptidase activity)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_019157556.1	PREDICTED: uncharacterized protein LOC109154146 [Ipomoea nil]	0
TrEMBL	A0A5N6NFJ1	Transposon protein, putative, CACTA, En/Spm sub-class OS=Mikania micrantha OX=192012 GN=E3N88_23661 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl83028, Sgl83243
Asteraceae	Flaveria trinervia	1	Ftri11G21610
Plumbaginaceae	Limonium bicolor	205	Lb0G36902, Lb0G37063, Lb0G37200, Lb0G37615, Lb0G37746 ... Lb1G00016, Lb1G00025, Lb1G00041, Lb1G00216, Lb1G00446, Lb1G00496, Lb1G00537, Lb1G00838, Lb1G00881, Lb1G01217, Lb1G01250, Lb1G01420, Lb1G01727, Lb1G01739, Lb1G01864, Lb1G02109, Lb1G02190, Lb1G02386, Lb1G02665, Lb1G02901, Lb1G04123, Lb1G04369, Lb1G04498, Lb1G04508, Lb1G04544, Lb1G04801, Lb1G04989, Lb1G05062, Lb1G05705, Lb1G06154, Lb1G06343, Lb1G06536, Lb1G07190, Lb1G07606, Lb1G08079, Lb1G08084, Lb2G08488, Lb2G08848, Lb2G09003, Lb2G09148, Lb2G09151, Lb2G09732, Lb2G10130, Lb2G10257, Lb2G10268, Lb2G10796, Lb2G11162, Lb2G11275, Lb2G11363, Lb2G11364, Lb2G11700, Lb2G11973, Lb2G12024, Lb2G12090, Lb2G12144, Lb2G12148, Lb2G12772, Lb2G14019, Lb2G14433, Lb2G14511, Lb2G14738, Lb2G14769, Lb2G14775, Lb2G14777, Lb2G14779, Lb2G14787, Lb2G14822, Lb2G14863, Lb2G15122, Lb3G15887, Lb3G15944, Lb3G16026, Lb3G16136, Lb3G16486, Lb3G16505, Lb3G16933, Lb3G16974, Lb3G18077, Lb3G18799, Lb3G19247, Lb3G19458, Lb3G19924, Lb3G20000, Lb3G20090, Lb3G20112, Lb3G20377, Lb3G21074, Lb3G21407, Lb4G21885, Lb4G22209, Lb4G22210, Lb4G22510, Lb4G23391, Lb4G23834, Lb4G24203, Lb4G24542, Lb4G24623, Lb4G24702, Lb4G25029, Lb4G25228, Lb4G25239, Lb4G25243, Lb4G25342, Lb4G25423, Lb4G25437, Lb4G25535, Lb4G25571, Lb4G26024, Lb4G26130, Lb4G26162, Lb4G26268, Lb4G26311, Lb4G26371, Lb5G26430, Lb5G26481, Lb5G26498, Lb5G26520, Lb5G26533, Lb5G26534, Lb5G26570, Lb5G26588, Lb5G26681, Lb5G26742, Lb5G26986, Lb5G26989, Lb5G27035, Lb5G27103, Lb5G27152, Lb5G27158, Lb5G27187, Lb5G27188, Lb5G27190, Lb5G27320, Lb5G27668, Lb5G28081, Lb5G28149, Lb5G28249, Lb5G28756, Lb5G28862, Lb5G29295, Lb5G29470, Lb5G29520, Lb5G29610, Lb6G29651, Lb6G30138, Lb6G30357, Lb6G30358, Lb6G30382, Lb6G30561, Lb6G30663, Lb6G30781, Lb6G30811, Lb6G30830, Lb6G30840, Lb6G30846, Lb6G30864, Lb6G30937, Lb6G31137, Lb6G31222, Lb6G31418, Lb6G31748, Lb6G31849, Lb6G32045, Lb6G32399, Lb6G32595, Lb7G32703, Lb7G32755, Lb7G32868, Lb7G33086, Lb7G33313, Lb7G33361, Lb7G33383, Lb7G33437, Lb7G33438, Lb7G33475, Lb7G33577, Lb7G33692, Lb7G33720, Lb7G34424, Lb7G34589, Lb7G34667, Lb7G34684, Lb7G34766, Lb7G34767, Lb7G34778, Lb7G34790, Lb7G35224, Lb7G35252, Lb7G35388, Lb7G35405, Lb7G35411, Lb7G35542, Lb7G35545, Lb8G35638, Lb8G35639, Lb8G35768, Lb8G35859, Lb8G35969, Lb8G36442, Lb8G36575
Poaceae	Lolium multiflorum	4	gene-QYE76_040894, gene-QYE76_049498, gene-QYE76_050588 ... gene-QYE76_070047