Basic Information
Locus ID:
Lb3G19232
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Plant transposase (Ptta/En/Spm family)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 205700378 | 205704434 | - | Lb3G19232 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.56 | 65,097.11 Da | 32.05 | 67.15 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 369 | 501 | 2.6E-25 | IPR004252 |
| Pfam | PF13963 | Transposase-associated domain | 3 | 69 | 1.2E-11 | IPR029480 |
| Pfam | PF13963 | Transposase-associated domain | 3 | 69 | 1.2E-11 | IPR029480 |
| Pfam | PF03004 | Plant transposase (Ptta/En/Spm family) | 369 | 501 | 2.6E-25 | IPR004252 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 481 | 515 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 481 | 515 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G40087.1 | Plant transposase (Ptta/En/Spm family). | 0 |
| RefSeq | XP_039134219.1 | uncharacterized protein LOC120271605 [Dioscorea cayenensis subsp. rotundata] | 0 |
| TrEMBL | A0A1S2Z1G2 | uncharacterized protein LOC101499970 isoform X2 OS=Cicer arietinum OX=3827 GN=LOC101504026 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||