halophFGD

Basic Information

Locus ID: Lb3G19170

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr03	201845264	201847101	+	Lb3G19170

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.73	22,815.97 Da	25.67	73.09	-0.50

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	61	197	9.6E-26	IPR002130
Pfam	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	61	197	9.6E-26	IPR002130
SUPERFAMILY	SSF50891	Cyclophilin-like	49	200	6.87E-42	IPR029000
SUPERFAMILY	SSF50891	Cyclophilin-like	49	200	6.87E-42	IPR029000
Gene3D	G3DSA:2.40.100.10	-	38	105	2.2E-10	IPR029000
Gene3D	G3DSA:2.40.100.10	-	106	202	5.4E-36	IPR029000
Gene3D	G3DSA:2.40.100.10	-	38	105	2.2E-10	IPR029000
Gene3D	G3DSA:2.40.100.10	-	106	202	5.4E-36	IPR029000
ProSiteProfiles	PS50072	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile.	54	199	25.690172	IPR002130
ProSiteProfiles	PS50072	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile.	54	199	25.690172	IPR002130
PRINTS	PR00153	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	72	87	3.6E-23	IPR002130
PRINTS	PR00153	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	160	175	3.6E-23	IPR002130
PRINTS	PR00153	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	160	175	3.6E-23	IPR002130
PRINTS	PR00153	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	132	147	3.6E-23	IPR002130
PRINTS	PR00153	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	147	159	3.6E-23	IPR002130
PRINTS	PR00153	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	72	87	3.6E-23	IPR002130
PRINTS	PR00153	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	132	147	3.6E-23	IPR002130
PRINTS	PR00153	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	147	159	3.6E-23	IPR002130

Gene Ontology

Biological Process:

GO:0000413 (protein peptidyl-prolyl isomerization)

Molecular Function:

GO:0003755 (peptidyl-prolyl cis-trans isomerase activity)

KEGG Pathway

KO Term:

K01802 (peptidylprolyl isomerase [EC:5.2.1.8])

Best hit

Source	Best Hit ID	Description
TAIR	AT5G58710.1	rotamase CYP 7. Encodes cyclophilin ROC7.
RefSeq	XP_047967644.1	peptidyl-prolyl cis-trans isomerase CYP20-1-like [Salvia hispanica]
Swiss-Prot	Q9SP02	Peptidyl-prolyl cis-trans isomerase CYP20-1 OS=Arabidopsis thaliana OX=3702 GN=CYP20-1 PE=1 SV=1
TrEMBL	A0A0A0KH44	Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G185300 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	9	jg10021, jg16661, jg28840, jg34482, jg38018, jg4506, jg5331 ... jg7832, jg9624
Aizoaceae	Mesembryanthemum crystallinum	7	gene_13529, gene_17002, gene_17994, gene_26660, gene_6900 ... gene_8458, gene_8601
Amaranthaceae	Atriplex hortensis	5	Ah000298, Ah006313, Ah013975, Ah019662, Ah027843
Amaranthaceae	Beta vulgaris	6	BVRB_2g023770, BVRB_3g059000, BVRB_5g120120, BVRB_6g150350 ... BVRB_7g172160, BVRB_9g214560
Amaranthaceae	Salicornia bigelovii	13	Sbi_jg12155, Sbi_jg1568, Sbi_jg16643, Sbi_jg22429 ... Sbi_jg31603, Sbi_jg34974, Sbi_jg38467, Sbi_jg42551, Sbi_jg45179, Sbi_jg47097, Sbi_jg57667, Sbi_jg61209, Sbi_jg6574
Amaranthaceae	Salicornia europaea	7	Seu_jg15351, Seu_jg16310, Seu_jg21376, Seu_jg22940 ... Seu_jg25342, Seu_jg26985, Seu_jg3177
Amaranthaceae	Suaeda aralocaspica	8	GOSA_00002724, GOSA_00002726, GOSA_00003363, GOSA_00006448 ... GOSA_00008138, GOSA_00016451, GOSA_00020385, GOSA_00025844
Amaranthaceae	Suaeda glauca	11	Sgl01881, Sgl07058, Sgl35504, Sgl54280, Sgl55402, Sgl59620 ... Sgl61504, Sgl62909, Sgl67477, Sgl72788, Sgl76327
Amaranthaceae	Chenopodium album	23	gene:ENSEOMG00000002191, gene:ENSEOMG00000005078 ... gene:ENSEOMG00000005583, gene:ENSEOMG00000010519, gene:ENSEOMG00000014570, gene:ENSEOMG00000015778, gene:ENSEOMG00000016763, gene:ENSEOMG00000017703, gene:ENSEOMG00000018185, gene:ENSEOMG00000024268, gene:ENSEOMG00000024798, gene:ENSEOMG00000024911, gene:ENSEOMG00000026393, gene:ENSEOMG00000027469, gene:ENSEOMG00000029308, gene:ENSEOMG00000036174, gene:ENSEOMG00000037578, gene:ENSEOMG00000039676, gene:ENSEOMG00000041964, gene:ENSEOMG00000043100, gene:ENSEOMG00000049065, gene:ENSEOMG00000050105, gene:ENSEOMG00000052892
Amaranthaceae	Chenopodium quinoa	11	CQ.Regalona.r1.2AG0021530, CQ.Regalona.r1.3AG0011270 ... CQ.Regalona.r1.3BG0011440, CQ.Regalona.r1.4BG0011650, CQ.Regalona.r1.5AG0025390, CQ.Regalona.r1.5BG0026950, CQ.Regalona.r1.6AG0002540, CQ.Regalona.r1.6BG0002500, CQ.Regalona.r1.7BG0003310, CQ.Regalona.r1.9AG0021270, CQ.Regalona.r1.9BG0001350
Anacardiaceae	Pistacia vera	6	pistato.v30007070, pistato.v30026540, pistato.v30061450 ... pistato.v30183770, pistato.v30228930, pistato.v30252560
Apiaceae	Apium graveolens	9	Ag1G01083, Ag3G02528, Ag4G01705, Ag6G01321, Ag6G02138 ... Ag7G01295, Ag8G02288, Ag9G02378, AgUnG00868
Arecaceae	Cocos nucifera	5	COCNU_02G013910, COCNU_07G002010, COCNU_08G008550 ... COCNU_09G003890, COCNU_10G010440
Arecaceae	Phoenix dactylifera	8	gene-LOC103697249, gene-LOC103698529, gene-LOC103699121 ... gene-LOC103703857, gene-LOC103706143, gene-LOC103712987, gene-LOC103714064, gene-LOC120105875
Asparagaceae	Asparagus officinalis	6	AsparagusV1_01.3097.V1.1, AsparagusV1_01.682.V1.1 ... AsparagusV1_03.563.V1.1, AsparagusV1_05.283.V1.1, AsparagusV1_06.1165.V1.1, AsparagusV1_09.1407.V1.1
Asteraceae	Flaveria trinervia	8	Ftri10G19419, Ftri12G09082, Ftri13G07329, Ftri1G33373 ... Ftri4G10426, Ftri5G26140, Ftri9G00890, Ftri9G07232
Brassicaceae	Arabidopsis thaliana	10	AT2G16600.1, AT2G21130.1, AT2G29960.1, AT3G55920.1 ... AT3G56070.1, AT3G62030.2, AT4G34870.1, AT4G38740.1, AT5G13120.1, AT5G58710.1
Brassicaceae	Eutrema salsugineum	12	Thhalv10000350m.g.v1.0, Thhalv10006033m.g.v1.0 ... Thhalv10006185m.g.v1.0, Thhalv10006270m.g.v1.0, Thhalv10010699m.g.v1.0, Thhalv10014434m.g.v1.0, Thhalv10014704m.g.v1.0, Thhalv10016970m.g.v1.0, Thhalv10022161m.g.v1.0, Thhalv10022880m.g.v1.0, Thhalv10026397m.g.v1.0, Thhalv10027585m.g.v1.0
Brassicaceae	Schrenkiella parvula	10	Sp3g30130.v2.2, Sp4g00280.v2.2, Sp4g12520.v2.2 ... Sp5g01330.v2.2, Sp5g06460.v2.2, Sp5g06600.v2.2, Sp6g20400.v2.2, Sp6g30860.v2.2, Sp7g32640.v2.2, Sp7g37060.v2.2
Brassicaceae	Brassica nigra	12	BniB01g014220.2N, BniB02g038150.2N, BniB02g089580.2N ... BniB03g015620.2N, BniB04g026630.2N, BniB05g003420.2N, BniB06g019010.2N, BniB06g061670.2N, BniB08g006120.2N, BniB08g012990.2N, BniB08g070670.2N, BniB08g076250.2N
Casuarinaceae	Casuarina equisetifolia	8	Ceq02G0138, Ceq04G2311, Ceq06G0565, Ceq06G2057, Ceq06G2180 ... Ceq07G0976, Ceq07G1659, Ceq08G1878
Casuarinaceae	Casuarina glauca	8	Cgl02G0154, Cgl04G2514, Cgl06G0585, Cgl06G2172, Cgl06G2297 ... Cgl07G1019, Cgl07G1797, Cgl08G1933
Cymodoceaceae	Cymodocea nodosa	5	gene.Cymno03g05370, gene.Cymno08g05690, gene.Cymno14g00050 ... gene.Cymno14g01720, gene.Cymno14g10590
Dunaliellaceae	Dunaliella salina	8	Dusal.0088s00011.v1.0, Dusal.0283s00008.v1.0 ... Dusal.0290s00017.v1.0, Dusal.0574s00008.v1.0, Dusal.0792s00004.v1.0, Dusal.0916s00002.v1.0, Dusal.1065s00003.v1.0, Dusal.1156s00003.v1.0
Hydrocharitaceae	Thalassia testudinum	6	gene.Thate01g12720, gene.Thate02g02220, gene.Thate02g02330 ... gene.Thate08g02290, gene.Thate08g02320, gene.Thate08g11440
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-6322
Nitrariaceae	Nitraria sibirica	8	evm.TU.LG02.1870, evm.TU.LG03.2212, evm.TU.LG03.812 ... evm.TU.LG04.1156, evm.TU.LG04.566, evm.TU.LG07.1418, evm.TU.LG08.268, evm.TU.LG09.1093
Plantaginaceae	Plantago ovata	8	Pov_00001571, Pov_00007383, Pov_00011800, Pov_00013731 ... Pov_00016317, Pov_00019607, Pov_00025951, Pov_00034209
Plumbaginaceae	Limonium bicolor	5	Lb2G12692, Lb3G19170, Lb3G19192, Lb7G33676, Lb7G34335
Poaceae	Echinochloa crus-galli	26	AH02.1329, AH03.1146, AH03.391, AH06.2925, AH06.2926 ... AH07.2000, AH07.203, BH01.2845, BH02.1377, BH03.1305, BH05.1262, BH06.2716, BH06.2717, BH07.1968, BH07.217, BH07.902, CH01.2775, CH01.3054, CH02.1486, CH03.1470, CH03.4653, CH03.548, CH05.1439, CH06.3051, CH06.3052, CH07.1828
Poaceae	Eleusine coracana subsp. coracana	18	gene-QOZ80_1AG0003090, gene-QOZ80_1BG0051560 ... gene-QOZ80_2AG0099660, gene-QOZ80_2AG0105580, gene-QOZ80_2AG0120190, gene-QOZ80_2BG0153100, gene-QOZ80_2BG0153110, gene-QOZ80_2BG0159010, gene-QOZ80_2BG0174440, gene-QOZ80_5AG0408910, gene-QOZ80_5BG0457300, gene-QOZ80_6AG0524970, gene-QOZ80_6AG0550300, gene-QOZ80_6AG0550310, gene-QOZ80_6BG0478600, gene-QOZ80_6BG0503880, gene-QOZ80_7AG0558060, gene-QOZ80_7BG0589180
Poaceae	Hordeum vulgare	8	HORVU.MOREX.r3.1HG0000850.1, HORVU.MOREX.r3.2HG0149220.1 ... HORVU.MOREX.r3.3HG0248260.1, HORVU.MOREX.r3.4HG0331420.1.CDS1, HORVU.MOREX.r3.6HG0549510.1.CDS1, HORVU.MOREX.r3.6HG0577650.1, HORVU.MOREX.r3.6HG0631730.1, HORVU.MOREX.r3.7HG0726010.1
Poaceae	Lolium multiflorum	9	gene-QYE76_015138, gene-QYE76_019787, gene-QYE76_019788 ... gene-QYE76_021461, gene-QYE76_024224, gene-QYE76_035716, gene-QYE76_039563, gene-QYE76_042829, gene-QYE76_052617
Poaceae	Oryza coarctata	14	Oco01G008280, Oco02G008550, Oco03G001100, Oco03G005370 ... Oco04G001020, Oco04G005440, Oco09G000120, Oco11G016860, Oco11G016870, Oco12G017080, Oco12G017090, Oco13G002580, Oco14G002790, Oco18G012310
Poaceae	Oryza sativa	9	LOC_Os01g18210.1, LOC_Os02g02890.1, LOC_Os02g10970.3 ... LOC_Os05g01270.1, LOC_Os06g49470.1, LOC_Os06g49480.1, LOC_Os07g08190.1, LOC_Os09g39780.2, LOC_Os10g06630.1
Poaceae	Paspalum vaginatum	12	gene-BS78_02G054300, gene-BS78_03G125000, gene-BS78_K326000 ... gene-BS78_04G016100, gene-BS78_04G079600, gene-BS78_04G148500, gene-BS78_09G006400, gene-BS78_09G115100, gene-BS78_10G271700, gene-BS78_10G271800, gene-BS78_10G271900, gene-BS78_K339800
Poaceae	Puccinellia tenuiflora	6	Pt_Chr0202064, Pt_Chr0303684, Pt_Chr0400968, Pt_Chr0603688 ... Pt_Chr0700649, Pt_Chr0700650
Poaceae	Sporobolus alterniflorus	23	Chr01G014240, Chr02G027520, Chr02G033020, Chr05G000830 ... Chr05G000840, Chr05G005240, Chr06G014000, Chr06G032850, Chr06G035830, Chr07G017470, Chr09G006920, Chr0G017850, Chr10G005380, Chr10G021800, Chr11G000780, Chr11G013840, Chr12G022630, Chr13G017500, Chr15G024220, Chr18G003190, Chr22G017090, Chr24G000380, Chr28G001910
Poaceae	Thinopyrum elongatum	10	Tel1E01G020900, Tel2E01G446300, Tel3E01G279500 ... Tel4E01G015200, Tel6E01G164300, Tel6E01G355500, Tel6E01G747100, Tel6E01G747200, Tel6E01G747300, Tel7E01G687300
Poaceae	Triticum dicoccoides	16	gene_TRIDC1AG000840, gene_TRIDC1BG001550 ... gene_TRIDC2AG032470, gene_TRIDC2BG036760, gene_TRIDC3AG020290, gene_TRIDC3BG030560, gene_TRIDC4AG047120, gene_TRIDC4BG001630, gene_TRIDC6AG008440, gene_TRIDC6AG025810, gene_TRIDC6AG059570, gene_TRIDC6BG012730, gene_TRIDC6BG032060, gene_TRIDC6BG070590, gene_TRIDC7AG057180, gene_TRIDC7BG049630
Poaceae	Triticum aestivum	24	TraesCS1A02G007500.1, TraesCS1B02G011100.1 ... TraesCS1D02G000800.2, TraesCS2A02G237700.1, TraesCS2B02G260600.1, TraesCS2D02G244700.1, TraesCS3A02G151100.1, TraesCS3B02G178000.1, TraesCS3D02G159000.1, TraesCS4A02G312600.1, TraesCS4D02G001600.1.cds1, TraesCS6A02G068900.1.cds1, TraesCS6A02G176900.1, TraesCS6A02G405800.1.cds1, TraesCS6A02G405900.1.cds1, TraesCS6B02G093100.2.cds1, TraesCS6B02G208900.2, TraesCS6B02G450300.1.cds1, TraesCS6B02G450400.1.cds1, TraesCS6D02G066700.1.cds1, TraesCS6D02G167200.3, TraesCS7A02G410100.2, TraesCS7B02G309500.2, TraesCS7D02G403300.2
Poaceae	Zea mays	16	Zm00001eb026640_P001, Zm00001eb095470_P001 ... Zm00001eb116950_P001, Zm00001eb181260_P001, Zm00001eb205540_P004, Zm00001eb227450_P001, Zm00001eb227460_P003, Zm00001eb235400_P002, Zm00001eb242390_P001, Zm00001eb242400_P001, Zm00001eb267580_P001, Zm00001eb272660_P002, Zm00001eb300930_P001, Zm00001eb301310_P005, Zm00001eb332450_P001, Zm00001eb356220_P001
Poaceae	Zoysia japonica	9	nbis-gene-24435, nbis-gene-40729, nbis-gene-40730 ... nbis-gene-42335, nbis-gene-42988, nbis-gene-43578, nbis-gene-48838, nbis-gene-52362, nbis-gene-9601
Poaceae	Zoysia macrostachya	10	Zma_g12413, Zma_g14851, Zma_g15852, Zma_g26235, Zma_g29835 ... Zma_g31114, Zma_g33376, Zma_g33377, Zma_g6088, Zma_g9629
Portulacaceae	Portulaca oleracea	11	evm.TU.LG05.167, evm.TU.LG07.830, evm.TU.LG08.1185 ... evm.TU.LG08.448, evm.TU.LG13.11, evm.TU.LG15.102, evm.TU.LG19.1047, evm.TU.LG22.1484, evm.TU.LG22.940, evm.TU.LG24.1049, evm.TU.LG25.1148
Posidoniaceae	Posidonia oceanica	7	gene.Posoc02g12920, gene.Posoc04g14510, gene.Posoc05g13260 ... gene.Posoc06g06960, gene.Posoc06g07010, gene.Posoc06g20380, gene.Posoc07g16070
Rhizophoraceae	Bruguiera sexangula	9	evm.TU.Scaffold_10_RagTag.835, evm.TU.Scaffold_12_RagTag.128 ... evm.TU.Scaffold_13_RagTag.926, evm.TU.Scaffold_15_RagTag.891, evm.TU.Scaffold_17_RagTag.91, evm.TU.Scaffold_1_RagTag.302, evm.TU.Scaffold_4_RagTag.960, evm.TU.Scaffold_5_RagTag.1040, evm.TU.Scaffold_5_RagTag.714
Rhizophoraceae	Carallia pectinifolia	10	nbisL1-mrna-10632, nbisL1-mrna-11313, nbisL1-mrna-13644 ... nbisL1-mrna-23268, nbisL1-mrna-25910, nbisL1-mrna-27084, nbisL1-mrna-27269, nbisL1-mrna-30091, nbisL1-mrna-6018, nbisL1-mrna-7867
Rhizophoraceae	Ceriops tagal	9	nbisL1-mrna-10225, nbisL1-mrna-10697, nbisL1-mrna-11023 ... nbisL1-mrna-11390, nbisL1-mrna-115, nbisL1-mrna-14102, nbisL1-mrna-15666, nbisL1-mrna-3208, nbisL1-mrna-5835
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-10349, nbisL1-mrna-14605, nbisL1-mrna-16292 ... nbisL1-mrna-3273, nbisL1-mrna-5361
Rhizophoraceae	Kandelia candel	10	add.evm.TU.utg000009l.460, add.evm.TU.utg000012l.75 ... add.evm.TU.utg000016l.27, evm.TU.utg000001l.501, evm.TU.utg000004l.156, evm.TU.utg000006l.336, evm.TU.utg000006l.618, evm.TU.utg000008l.618, evm.TU.utg000013l.49, evm.TU.utg000015l.549
Rhizophoraceae	Kandelia obovata	9	Maker00000875, Maker00002639, Maker00004172, Maker00006605 ... Maker00010991, Maker00012974, Maker00014114, Maker00015601, Maker00017111
Rhizophoraceae	Rhizophora apiculata	9	nbisL1-mrna-10173, nbisL1-mrna-11154, nbisL1-mrna-18580 ... nbisL1-mrna-1978, nbisL1-mrna-19864, nbisL1-mrna-3789, nbisL1-mrna-4453, nbisL1-mrna-6956, nbisL1-mrna-9951
Rhizophoraceae	Rhizophora mangle	9	nbisL1-mrna-16017, nbisL1-mrna-17637, nbisL1-mrna-19746 ... nbisL1-mrna-20857, nbisL1-mrna-22427, nbisL1-mrna-277, nbisL1-mrna-7349, nbisL1-mrna-7882, nbisL1-mrna-9295
Salicaceae	Populus euphratica	16	populus_peu01991, populus_peu01999, populus_peu03957 ... populus_peu04789, populus_peu08753, populus_peu12865, populus_peu15106, populus_peu15358, populus_peu19555, populus_peu20426, populus_peu31431, populus_peu32763, populus_peu33003, populus_peu34791, populus_peu35806, populus_peu36602
Solanaceae	Lycium barbarum	8	gene-LOC132599290, gene-LOC132606220, gene-LOC132606619 ... gene-LOC132608901, gene-LOC132616151, gene-LOC132626204, gene-LOC132626207, gene-LOC132635765
Solanaceae	Solanum chilense	7	SOLCI000331100, SOLCI000574800, SOLCI001443100 ... SOLCI002302200, SOLCI002879100, SOLCI005168800, SOLCI007481100
Solanaceae	Solanum pennellii	7	gene-LOC107004512, gene-LOC107007844, gene-LOC107023543 ... gene-LOC107023825, gene-LOC107026642, gene-LOC107028394, gene-LOC107032430
Tamaricaceae	Reaumuria soongarica	8	STRG.20855_chr08_-, STRG.30197_chr10_+, gene_11829 ... gene_18193, gene_1838, gene_3638, gene_4913, gene_9251
Tamaricaceae	Tamarix chinensis	6	TC04G0607, TC04G2868, TC05G1815, TC10G0082, TC11G1197 ... TC12G0713
Zosteraceae	Zostera marina	9	Zosma01g27250.v3.1, Zosma02g03300.v3.1, Zosma02g03800.v3.1 ... Zosma04g22850.v3.1, Zosma05g32090.v3.1, Zosma05g32100.v3.1, Zosma06g10700.v3.1, Zosma06g14080.v3.1, Zosma1015g00030.v3.1