Basic Information
Locus ID:
Lb3G19100
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 196571456 | 196577900 | - | Lb3G19100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 107,953.32 Da | 40.51 | 90.77 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 646 | 910 | 1.29901E-97 | - |
| CDD | cd14066 | STKc_IRAK | 646 | 910 | 1.29901E-97 | - |
| Pfam | PF11721 | Malectin domain | 385 | 557 | 1.5E-33 | IPR021720 |
| Pfam | PF13855 | Leucine rich repeat | 257 | 310 | 2.8E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 257 | 310 | 2.8E-7 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 385 | 557 | 1.5E-33 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 643 | 909 | 2.3E-50 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 643 | 909 | 2.3E-50 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 625 | 939 | 1.35E-83 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 94 | 354 | 1.11E-42 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 94 | 354 | 1.11E-42 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 625 | 939 | 1.35E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 601 | 715 | 3.0E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 254 | 5.0E-16 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 383 | 562 | 1.2E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 47 | 178 | 4.4E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 716 | 918 | 4.1E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 601 | 715 | 3.0E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 254 | 5.0E-16 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 383 | 562 | 1.2E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 255 | 368 | 4.8E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 255 | 368 | 4.8E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 47 | 178 | 4.4E-21 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 716 | 918 | 4.1E-62 | - |
| SMART | SM00220 | serkin_6 | 640 | 910 | 1.8E-33 | IPR000719 |
| SMART | SM00220 | serkin_6 | 640 | 910 | 1.8E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 640 | 916 | 38.138493 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 640 | 916 | 38.138493 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 761 | 773 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 761 | 773 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 942 | 964 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 942 | 964 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_052177925.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Diospyros lotus] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A140G4X5 | LRR-RLK OS=Vernicia montana OX=316732 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology