Basic Information
Locus ID:
Lb3G19099
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 196239567 | 196246064 | - | Lb3G19099 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.53 | 105,620.31 Da | 39.01 | 89.86 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 645 | 911 | 1.14414E-96 | - |
| CDD | cd14066 | STKc_IRAK | 645 | 911 | 1.14414E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 642 | 910 | 5.1E-50 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 294 | 353 | 2.0E-9 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 405 | 533 | 2.5E-27 | IPR021720 |
| Pfam | PF11721 | Malectin domain | 405 | 533 | 2.5E-27 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 642 | 910 | 5.1E-50 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 294 | 353 | 2.0E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 624 | 940 | 1.35E-82 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 94 | 376 | 1.22E-51 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 94 | 376 | 1.22E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 624 | 940 | 1.35E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 715 | 919 | 8.9E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 600 | 714 | 2.9E-36 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 404 | 561 | 2.7E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 282 | 392 | 1.4E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 45 | 281 | 8.5E-49 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 404 | 561 | 2.7E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 715 | 919 | 8.9E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 45 | 281 | 8.5E-49 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 282 | 392 | 1.4E-20 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 600 | 714 | 2.9E-36 | - |
| SMART | SM00220 | serkin_6 | 639 | 911 | 1.9E-33 | IPR000719 |
| SMART | SM00220 | serkin_6 | 639 | 911 | 1.9E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 639 | 917 | 37.968884 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 639 | 917 | 37.968884 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 762 | 774 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 762 | 774 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 943 | 968 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 943 | 968 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56130.2 | - | 0 |
| RefSeq | XP_028086347.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X5 [Camellia sinensis] | 0 |
| C0LGH2 | Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana OX=3702 GN=At1g56130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8J4QJY1 | Protein kinase domain-containing protein OS=Castanea mollissima OX=60419 GN=CMV_021521 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology