Basic Information
Locus ID:
Lb3G19097
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 196098708 | 196105175 | + | Lb3G19097 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.50 | 96,987.10 Da | 37.70 | 93.76 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 571 | 835 | 5.72622E-98 | - |
| CDD | cd14066 | STKc_IRAK | 571 | 835 | 5.72622E-98 | - |
| Pfam | PF11721 | Malectin domain | 357 | 466 | 5.4E-16 | IPR021720 |
| Pfam | PF13855 | Leucine rich repeat | 222 | 281 | 1.8E-9 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 357 | 466 | 5.4E-16 | IPR021720 |
| Pfam | PF13855 | Leucine rich repeat | 222 | 281 | 1.8E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 568 | 835 | 2.1E-50 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 568 | 835 | 2.1E-50 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 550 | 862 | 1.48E-83 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 550 | 862 | 1.48E-83 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 93 | 326 | 6.24E-42 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 93 | 326 | 6.24E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 211 | 346 | 9.4E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 641 | 843 | 4.7E-62 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 354 | 473 | 4.4E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 47 | 210 | 2.4E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 526 | 640 | 2.6E-36 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 354 | 473 | 4.4E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 47 | 210 | 2.4E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 641 | 843 | 4.7E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 526 | 640 | 2.6E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 211 | 346 | 9.4E-26 | IPR032675 |
| SMART | SM00220 | serkin_6 | 565 | 835 | 4.2E-33 | IPR000719 |
| SMART | SM00220 | serkin_6 | 565 | 835 | 4.2E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 565 | 841 | 37.912346 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 565 | 841 | 37.912346 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 686 | 698 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 686 | 698 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.3 | - | 0 |
| RefSeq | XP_028244896.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 isoform X4 [Glycine soja] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A140G4X5 | LRR-RLK OS=Vernicia montana OX=316732 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology