HalophFGD

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Basic Information
Locus ID: Lb3G19096
Species & Taxonomic ID: Limonium bicolor & 293754
Genome Assembly: GCA_023374045.1
Description: Protein ROOT INITIATION DEFECTIVE 3
Maps and Mapping Data
Chromosome Start End Strand ID
chr03 195878550 195880600 - Lb3G19096
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.11 23,622.66 Da 31.54 68.09 -0.74
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
KEGG Pathway
KO Term:
K14829 (pre-rRNA-processing protein IPI3)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G49180.1 Transducin/WD40 repeat-like superfamily protein. 0
RefSeq XP_052200913.1 protein ROOT INITIATION DEFECTIVE 3 [Diospyros lotus] 0
Swiss-Prot Q9M3B4 Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1 0
TrEMBL A0A7J0D9W5 Transducin/WD40 repeat-like superfamily protein OS=Actinidia rufa OX=165716 GN=Acr_00g0012990 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Plantaginaceae Plantago ovata 1 Pov_00029966
Plumbaginaceae Limonium bicolor 80 Lb0G36886, Lb0G36887, Lb0G37772, Lb0G38155, Lb0G38193 ...
Lb0G38347, Lb1G00948, Lb1G01147, Lb1G01591, Lb1G02625, Lb1G02820, Lb1G02852, Lb1G04343, Lb1G04639, Lb1G05087, Lb1G05597, Lb1G05963, Lb1G06535, Lb1G07279, Lb1G07281, Lb1G07990, Lb1G08043, Lb2G09223, Lb2G09468, Lb2G09844, Lb2G09848, Lb2G11693, Lb2G12153, Lb2G13242, Lb2G13325, Lb2G14500, Lb2G14591, Lb2G14761, Lb2G15067, Lb3G15627, Lb3G15827, Lb3G15894, Lb3G15899, Lb3G15900, Lb3G16217, Lb3G17174, Lb3G17349, Lb3G17676, Lb3G18214, Lb3G19096, Lb3G19232, Lb3G19600, Lb3G20294, Lb3G20487, Lb3G20488, Lb3G20490, Lb4G22660, Lb4G22735, Lb4G23163, Lb4G23298, Lb4G24426, Lb4G25227, Lb4G25897, Lb4G26010, Lb4G26063, Lb4G26366, Lb5G26727, Lb5G28015, Lb5G29538, Lb6G29862, Lb6G30293, Lb6G30330, Lb6G30593, Lb6G31279, Lb6G32079, Lb7G32807, Lb7G33414, Lb7G33483, Lb7G33604, Lb7G34482, Lb7G34630, Lb7G35316, Lb8G35799, Lb8G35833, Lb8G36218
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.