Basic Information
Locus ID:
Lb3G19068
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 193212043 | 193218898 | - | Lb3G19068 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.64 | 118,467.17 Da | 40.06 | 93.26 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 743 | 1007 | 1.82222E-94 | - |
| CDD | cd14066 | STKc_IRAK | 743 | 1007 | 1.82222E-94 | - |
| Pfam | PF13855 | Leucine rich repeat | 332 | 391 | 3.3E-9 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 465 | 643 | 8.5E-33 | IPR021720 |
| Pfam | PF13855 | Leucine rich repeat | 332 | 391 | 3.3E-9 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 740 | 1007 | 1.7E-49 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 465 | 643 | 8.5E-33 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 740 | 1007 | 1.7E-49 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 722 | 1026 | 8.09E-83 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 722 | 1026 | 8.09E-83 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 140 | 451 | 9.42E-49 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 140 | 451 | 9.42E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 698 | 812 | 2.8E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 813 | 1014 | 1.3E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 320 | 449 | 5.6E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 83 | 319 | 2.1E-48 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 320 | 449 | 5.6E-25 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 698 | 812 | 2.8E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 83 | 319 | 2.1E-48 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 464 | 648 | 1.7E-27 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 464 | 648 | 1.7E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 813 | 1014 | 1.3E-60 | - |
| SMART | SM00220 | serkin_6 | 737 | 1007 | 3.8E-34 | IPR000719 |
| SMART | SM00220 | serkin_6 | 737 | 1007 | 3.8E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 737 | 1013 | 38.251564 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 737 | 1013 | 38.251564 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 858 | 870 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 858 | 870 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_052177925.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Diospyros lotus] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A140G4X5 | LRR-RLK OS=Vernicia montana OX=316732 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology