Basic Information
Locus ID:
Lb3G19029
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Protein kinase and PP2C-like domain-containing
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 189350991 | 189355133 | + | Lb3G19029 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 72,577.93 Da | 39.93 | 88.91 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00143 | PP2Cc | 395 | 648 | 3.55474E-80 | IPR001932 |
| CDD | cd00143 | PP2Cc | 395 | 648 | 3.55474E-80 | IPR001932 |
| Pfam | PF00069 | Protein kinase domain | 41 | 314 | 3.4E-47 | IPR000719 |
| Pfam | PF00481 | Protein phosphatase 2C | 397 | 641 | 1.6E-63 | IPR001932 |
| Pfam | PF00069 | Protein kinase domain | 41 | 314 | 3.4E-47 | IPR000719 |
| Pfam | PF00481 | Protein phosphatase 2C | 397 | 641 | 1.6E-63 | IPR001932 |
| SUPERFAMILY | SSF81606 | PP2C-like | 385 | 650 | 6.28E-72 | IPR036457 |
| SUPERFAMILY | SSF81606 | PP2C-like | 385 | 650 | 6.28E-72 | IPR036457 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 40 | 324 | 2.7E-64 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 40 | 324 | 2.7E-64 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 29 | 351 | 2.8E-65 | - |
| Gene3D | G3DSA:3.60.40.10 | - | 386 | 653 | 4.7E-82 | IPR036457 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 29 | 351 | 2.8E-65 | - |
| Gene3D | G3DSA:3.60.40.10 | - | 386 | 653 | 4.7E-82 | IPR036457 |
| SMART | SM00220 | serkin_6 | 35 | 324 | 1.0E-41 | IPR000719 |
| SMART | SM00331 | PP2C_SIG_2 | 408 | 648 | 1.8E-4 | IPR001932 |
| SMART | SM00332 | PP2C_4 | 383 | 646 | 1.2E-79 | IPR001932 |
| SMART | SM00331 | PP2C_SIG_2 | 408 | 648 | 1.8E-4 | IPR001932 |
| SMART | SM00332 | PP2C_4 | 383 | 646 | 1.2E-79 | IPR001932 |
| SMART | SM00220 | serkin_6 | 35 | 324 | 1.0E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 35 | 319 | 37.46006 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 35 | 319 | 37.46006 | IPR000719 |
| ProSiteProfiles | PS51746 | PPM-type phosphatase domain profile. | 393 | 648 | 53.218121 | IPR001932 |
| ProSiteProfiles | PS51746 | PPM-type phosphatase domain profile. | 393 | 648 | 53.218121 | IPR001932 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 150 | 162 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 150 | 162 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 353 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40860.1 | protein kinase family protein / protein phosphatase 2C ( PP2C) family protein. | 0 |
| RefSeq | XP_030481348.1 | protein kinase and PP2C-like domain-containing protein [Cannabis sativa] | 0 |
| Q5JJY4 | Protein kinase and PP2C-like domain-containing protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0541900 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2I0HKW3 | protein kinase and PP2C-like domain-containing protein isoform X1 OS=Punica granatum OX=22663 GN=LOC116195581 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg15792 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_4542 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah022241 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g063620 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg58936, Sbi_jg63678 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg23212 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00012942 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl02336, Sgl07484 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000014493, gene:ENSEOMG00000032399 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0023470, CQ.Regalona.r1.3BG0024240 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30074770 |
| Apiaceae | Apium graveolens | 1 | Ag10G02213 |
| Arecaceae | Cocos nucifera | 2 | COCNU_06G008830, COCNU_06G008840 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103722343 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_05.2736.V1.1, AsparagusV1_05.2737.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri10G04851 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G40860.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10016363m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g23190.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB08g026450.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G0845 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G0954 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno11g00480 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0320s00002.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate03g01980, gene.Thate04g23680 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.2668 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00000079 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb3G19029 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.1950, BH02.2006, CH02.2168 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0020040, gene-QOZ80_1BG0069910 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0264760.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_053180 |
| Poaceae | Oryza coarctata | 2 | Oco01G012100, Oco02G012270 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g36080.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_03G168700 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr03G008180, Chr05G015400, Chr05G015520, Chr05G015620 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G351100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG029340, gene_TRIDC3BG056150 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G200800.1, TraesCS3B02G378000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb342010_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-21387 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g10502 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG07.359, evm.TU.LG15.586 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc04g01040 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_8_RagTag.222 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-10092 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-8540 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-17852 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000018l.851 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00002905 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-3155 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-11381 |
| Salicaceae | Populus euphratica | 1 | populus_peu26328 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132626441 |
| Solanaceae | Solanum chilense | 1 | SOLCI001366200 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107007788 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_12404 |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G2021 |
| Zosteraceae | Zostera marina | 1 | Zosma03g00750.v3.1 |