Basic Information
Locus ID:
Lb3G19007
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 188012431 | 188017065 | - | Lb3G19007 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 114,956.04 Da | 36.01 | 95.00 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 303 | 362 | 1.4E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 738 | 1019 | 2.2E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 303 | 362 | 1.4E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 519 | 578 | 6.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 738 | 1019 | 2.2E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 519 | 578 | 6.7E-7 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 112 | 434 | 1.33E-57 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 112 | 434 | 1.33E-57 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 404 | 652 | 2.89E-50 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 404 | 652 | 2.89E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 733 | 1021 | 2.83E-71 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 733 | 1021 | 2.83E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 815 | 1032 | 6.9E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 175 | 1.8E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 176 | 265 | 1.7E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 176 | 265 | 1.7E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 369 | 667 | 1.7E-79 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 266 | 364 | 1.0E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 704 | 814 | 2.1E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 815 | 1032 | 6.9E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 704 | 814 | 2.1E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 369 | 667 | 1.7E-79 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 175 | 1.8E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 266 | 364 | 1.0E-28 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 373 | 397 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 301 | 325 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 517 | 541 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 301 | 325 | 17.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 736 | 1026 | 5.9E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 517 | 541 | 150.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 736 | 1026 | 5.9E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 373 | 397 | 17.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 736 | 1022 | 38.845192 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 736 | 1022 | 38.845192 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 859 | 871 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 859 | 871 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_021614141.1 | receptor protein kinase CLAVATA1 [Manihot esculenta] | 0 |
| Q9SYQ8 | Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana OX=3702 GN=CLV1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A2C9VWB0 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_05G145600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology