Basic Information
Locus ID:
Lb3G18986
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 187158946 | 187165918 | - | Lb3G18986 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 47,681.22 Da | 40.56 | 96.37 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 332 | 407 | 1.3E-11 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 139 | 327 | 1.2E-25 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 332 | 407 | 1.3E-11 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 139 | 327 | 1.2E-25 | IPR002524 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 129 | 328 | 5.49E-36 | IPR027469 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 330 | 407 | 6.41E-15 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 129 | 328 | 5.49E-36 | IPR027469 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 330 | 407 | 6.41E-15 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 129 | 326 | 6.3E-37 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 333 | 422 | 1.1E-15 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 129 | 326 | 6.3E-37 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 333 | 422 | 1.1E-15 | IPR036837 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 131 | 407 | 1.1E-29 | IPR002524 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 131 | 407 | 1.1E-29 | IPR002524 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58060.1 | Cation efflux family protein. | 0 |
| RefSeq | XP_030481509.1 | metal tolerance protein 4 [Cannabis sativa] | 0 |
| Q10PP8 | Metal tolerance protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7J6FGX7 | ZT_dimer domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_013329 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology