Basic Information
Locus ID:
Lb3G18983
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 187030118 | 187033399 | - | Lb3G18983 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 32,033.06 Da | 40.49 | 67.38 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 16 | 283 | 6.6E-77 | IPR033389 |
| Pfam | PF02309 | AUX/IAA family | 16 | 283 | 6.6E-77 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 183 | 273 | 1.24E-20 | - |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 183 | 273 | 1.24E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 178 | 285 | 2.7E-44 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 178 | 285 | 2.7E-44 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 183 | 274 | 24.791765 | IPR000270 |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 183 | 274 | 24.791765 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 171 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_002531288.2 | auxin-responsive protein IAA16 [Ricinus communis] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067JIG3 | Auxin-responsive protein OS=Jatropha curcas OX=180498 GN=JCGZ_23500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology