Basic Information
Locus ID:
Lb3G18919
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Short Name:
OASC
Description:
Belongs to the cysteine synthase cystathionine beta- synthase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 179680513 | 179689702 | - | Lb3G18919 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.92 | 40,685.46 Da | 39.63 | 92.69 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01561 | CBS_like | 75 | 365 | 1.12946E-152 | - |
| CDD | cd01561 | CBS_like | 75 | 365 | 1.12946E-152 | - |
| Pfam | PF00291 | Pyridoxal-phosphate dependent enzyme | 71 | 355 | 1.9E-67 | IPR001926 |
| Pfam | PF00291 | Pyridoxal-phosphate dependent enzyme | 71 | 355 | 1.9E-67 | IPR001926 |
| SUPERFAMILY | SSF53686 | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 66 | 375 | 4.45E-103 | IPR036052 |
| SUPERFAMILY | SSF53686 | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 66 | 375 | 4.45E-103 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 72 | 365 | 1.3E-136 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 108 | 210 | 1.3E-136 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 72 | 365 | 1.3E-136 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 108 | 210 | 1.3E-136 | IPR036052 |
| TIGRFAM | TIGR01136 | cysKM: cysteine synthase | 71 | 369 | 3.4E-135 | IPR005856 |
| TIGRFAM | TIGR01139 | cysK: cysteine synthase A | 71 | 369 | 9.3E-140 | IPR005859 |
| TIGRFAM | TIGR01136 | cysKM: cysteine synthase | 71 | 369 | 3.4E-135 | IPR005856 |
| TIGRFAM | TIGR01139 | cysK: cysteine synthase A | 71 | 369 | 9.3E-140 | IPR005859 |
| ProSitePatterns | PS00901 | Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. | 96 | 114 | - | IPR001216 |
| ProSitePatterns | PS00901 | Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. | 96 | 114 | - | IPR001216 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko00270 (Cysteine and methionine metabolism)
map00270 (Cysteine and methionine metabolism)
ko00920 (Sulfur metabolism)
map00920 (Sulfur metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G43750.1 | O-acetylserine (thiol) lyase B. Arabidopsis thaliana O-acetylserine (thiol) lyase (OAS-TL) isoform oasB, the key enzyme for fixation of inorganic sulfide. It catalyzes the formation of cysteine from O-acetylserine and inorganic sulfide. | 0 |
| RefSeq | XP_024194563.1 | cysteine synthase, chloroplastic/chromoplastic [Rosa chinensis] | 0 |
| P32260 | Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea OX=3562 GN=CYSK PE=1 SV=2 | 0 | |
| TrEMBL | B2Z452 | Cysteine synthase OS=Knorringia sibirica OX=328376 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology