Basic Information
Locus ID:
Lb3G18912
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 178775440 | 178784477 | - | Lb3G18912 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.20 | 78,920.02 Da | 45.32 | 73.71 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14016 | STKc_CK1 | 147 | 422 | 3.43286E-129 | - |
| CDD | cd14016 | STKc_CK1 | 147 | 422 | 3.43286E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 148 | 380 | 1.8E-16 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 148 | 380 | 1.8E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 147 | 435 | 1.62E-62 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 147 | 435 | 1.62E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 112 | 465 | 7.4E-81 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 112 | 465 | 7.4E-81 | - |
| SMART | SM00220 | serkin_6 | 148 | 422 | 8.0E-12 | IPR000719 |
| SMART | SM00220 | serkin_6 | 148 | 422 | 8.0E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 148 | 422 | 22.930307 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 148 | 422 | 22.930307 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 154 | 185 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 273 | 285 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 273 | 285 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 154 | 185 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 53 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03940.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_028110257.1 | casein kinase 1-like protein HD16 isoform X2 [Camellia sinensis] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8ZD58 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology