Basic Information
Locus ID:
Lb3G18832
Species & Taxonomic ID:
Limonium bicolor & 293754
Genome Assembly:
GCA_023374045.1
Description:
Encoded by
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 172202426 | 172208203 | - | Lb3G18832 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 97,357.46 Da | 40.09 | 74.95 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03108 | MuDR family transposase | 340 | 401 | 2.0E-7 | IPR004332 |
| Pfam | PF03108 | MuDR family transposase | 340 | 401 | 2.0E-7 | IPR004332 |
| Pfam | PF10551 | MULE transposase domain | 541 | 597 | 1.2E-8 | IPR018289 |
| Pfam | PF04434 | SWIM zinc finger | 753 | 781 | 5.7E-7 | IPR007527 |
| Pfam | PF04434 | SWIM zinc finger | 753 | 781 | 5.7E-7 | IPR007527 |
| Pfam | PF10551 | MULE transposase domain | 541 | 597 | 1.2E-8 | IPR018289 |
| SMART | SM00575 | 26again6 | 760 | 787 | 0.004 | IPR006564 |
| SMART | SM00575 | 26again6 | 760 | 787 | 0.004 | IPR006564 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 753 | 785 | 9.791913 | IPR007527 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 753 | 785 | 9.791913 | IPR007527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 281 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 281 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G49920.1 | MuDR family transposase. | 0 |
| RefSeq | XP_020993195.2 | uncharacterized protein LOC107477299 [Arachis duranensis] | 0 |
| Q9LNG5 | Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6P4CP14 | uncharacterized protein LOC107479070 OS=Arachis duranensis OX=130453 GN=LOC107479070 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||