halophFGD

Basic Information

Locus ID: Lb3G18590

Species & Taxonomic ID: Limonium bicolor & 293754

Genome Assembly: GCA_023374045.1

Description: guanine nucleotide-binding protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr03	162015869	162023397	-	Lb3G18590

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.75	94,556.73 Da	48.32	71.36	-0.61

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF00503	G-protein alpha subunit	513	827	6.2E-58	IPR001019
Pfam	PF00503	G-protein alpha subunit	513	827	6.2E-58	IPR001019
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	508	827	3.3E-13	IPR027417
SUPERFAMILY	SSF47895	Transducin (alpha subunit), insertion domain	544	695	3.4E-20	IPR011025
SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	508	827	3.3E-13	IPR027417
SUPERFAMILY	SSF47895	Transducin (alpha subunit), insertion domain	544	695	3.4E-20	IPR011025
Gene3D	G3DSA:3.40.50.300	-	722	834	1.6E-25	IPR027417
Gene3D	G3DSA:1.10.400.10	-	544	696	8.7E-31	IPR011025
Gene3D	G3DSA:3.40.50.300	-	722	834	1.6E-25	IPR027417
Gene3D	G3DSA:1.10.400.10	-	544	696	8.7E-31	IPR011025
SMART	SM00275	galpha_1	494	835	8.0E-14	IPR001019
SMART	SM00275	galpha_1	494	835	8.0E-14	IPR001019
ProSiteProfiles	PS51882	G-alpha domain profile.	513	835	51.95105	IPR001019
ProSiteProfiles	PS51882	G-alpha domain profile.	513	835	51.95105	IPR001019
PRINTS	PR00318	Alpha G protein (transducin) signature	685	707	1.2E-11	IPR001019
PRINTS	PR00318	Alpha G protein (transducin) signature	685	707	1.2E-11	IPR001019
PRINTS	PR00318	Alpha G protein (transducin) signature	516	531	1.2E-11	IPR001019
PRINTS	PR00318	Alpha G protein (transducin) signature	756	784	1.2E-11	IPR001019
PRINTS	PR00318	Alpha G protein (transducin) signature	756	784	1.2E-11	IPR001019
PRINTS	PR00318	Alpha G protein (transducin) signature	516	531	1.2E-11	IPR001019
MobiDBLite	mobidb-lite	consensus disorder prediction	583	603	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	583	598	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	161	188	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	200	247	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	168	187	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	583	598	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	161	188	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	200	247	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	200	218	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	168	187	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	583	603	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	233	247	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	233	247	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	200	218	-	-

Gene Ontology

Biological Process:

GO:0007165 (signal transduction) GO:0007186 (G protein-coupled receptor signaling pathway)

Molecular Function:

GO:0003924 (GTPase activity) GO:0019001 (guanyl nucleotide binding) GO:0031683 (G-protein beta/gamma-subunit complex binding)

KEGG Pathway

KO Term:

K04630 (guanine nucleotide-binding protein G(i) subunit alpha)

Pathway:

ko04015 (Rap1 signaling pathway) map04015 (Rap1 signaling pathway) ko04022 (cGMP-PKG signaling pathway) map04022 (cGMP-PKG signaling pathway) ko04024 (cAMP signaling pathway) map04024 (cAMP signaling pathway) ko04062 (Chemokine signaling pathway) map04062 (Chemokine signaling pathway) ko04071 (Sphingolipid signaling pathway) map04071 (Sphingolipid signaling pathway) ko04371 (Apelin signaling pathway) map04371 (Apelin signaling pathway) map04611 (Platelet activation) map04670 (Leukocyte transendothelial migration) ko04916 (Melanogenesis) map04916 (Melanogenesis)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G31930.1	extra-large GTP-binding protein 3. Encodes XLG3 (extra-large G protein 3) that shows significant similarity to the G protein alpha subunit in its C terminal region. Involved in the regulation of root morphological and growth responses.
RefSeq	XP_028239978.1	extra-large guanine nucleotide-binding protein 3-like isoform X2 [Glycine soja]
Swiss-Prot	Q9C516	Extra-large guanine nucleotide-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=XLG3 PE=1 SV=1
TrEMBL	A0A0R0JAV0	Extra-large guanine nucleotide-binding protein 3-like OS=Glycine max OX=3847 GN=GLYMA_07G106100 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg26233, jg28719, jg28720, jg28724, jg30277, jg40092
Aizoaceae	Mesembryanthemum crystallinum	2	gene_16902, gene_21599
Amaranthaceae	Atriplex hortensis	2	Ah010334, Ah026672
Amaranthaceae	Beta vulgaris	2	BVRB_6g138440, BVRB_9g218240
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg12509, Sbi_jg45804, Sbi_jg51541, Sbi_jg5808
Amaranthaceae	Salicornia europaea	2	Seu_jg13561, Seu_jg20166
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00013493, GOSA_00022394
Amaranthaceae	Suaeda glauca	5	Sgl00025, Sgl05094, Sgl34187, Sgl39484, Sgl39533
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000000492, gene:ENSEOMG00000002698 ... gene:ENSEOMG00000018646, gene:ENSEOMG00000025922, gene:ENSEOMG00000037007, gene:ENSEOMG00000051112
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.6AG0018580, CQ.Regalona.r1.6BG0019680 ... CQ.Regalona.r1.7BG0008380, CQ.Regalona.r1.9AG0016070
Anacardiaceae	Pistacia vera	5	pistato.v30113590, pistato.v30113600, pistato.v30207110 ... pistato.v30286810, pistato.v30286830
Apiaceae	Apium graveolens	5	Ag10G02270, Ag3G00207, Ag6G02593, Ag9G00129, AgUnG00077
Arecaceae	Cocos nucifera	2	COCNU_06G017810, COCNU_14G010180
Arecaceae	Phoenix dactylifera	2	gene-LOC103709166, gene-LOC103723888
Asparagaceae	Asparagus officinalis	3	AsparagusV1_03.2304.V1.1, AsparagusV1_05.3397.V1.1 ... AsparagusV1_07.3083.V1.1
Asteraceae	Flaveria trinervia	2	Ftri14G14598, Ftri17G19545
Brassicaceae	Arabidopsis thaliana	2	AT2G23460.1, AT4G34390.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10000039m.g.v1.0, Thhalv10024380m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp4g02460.v2.2, Sp7g32180.v2.2
Brassicaceae	Brassica nigra	4	BniB01g020300.2N, BniB02g086980.2N, BniB03g020630.2N ... BniB05g003920.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq08G1664, Ceq09G0026
Casuarinaceae	Casuarina glauca	2	Cgl08G1704, Cgl09G0031
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno01g15050, gene.Cymno11g03530
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate03g05340, gene.Thate06g13380, gene.Thate06g16410
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-10534, nbisL1-mrna-7068
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG02.2228, evm.TU.LG08.72
Plantaginaceae	Plantago ovata	2	Pov_00029359, Pov_00035537
Plumbaginaceae	Limonium bicolor	4	Lb1G05965, Lb1G05969, Lb3G17191, Lb3G18590
Poaceae	Echinochloa crus-galli	3	AH05.3920, BH05.4000, CH05.4200
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_5AG0396300, gene-QOZ80_5BG0444560
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.5HG0437540.1
Poaceae	Lolium multiflorum	1	gene-QYE76_000482
Poaceae	Oryza coarctata	2	Oco23G009580, Oco24G009310
Poaceae	Oryza sativa	1	LOC_Os12g40190.1
Poaceae	Paspalum vaginatum	1	gene-BS78_08G127700
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0704170
Poaceae	Sporobolus alterniflorus	4	Chr04G018270, Chr06G018900, Chr19G008290, Chr27G008330
Poaceae	Thinopyrum elongatum	1	Tel5E01G134400
Poaceae	Triticum dicoccoides	2	gene_TRIDC5AG009970, gene_TRIDC5BG011620
Poaceae	Triticum aestivum	3	TraesCS5A02G064400.1, TraesCS5B02G068300.2 ... TraesCS5D02G075200.1
Poaceae	Zea mays	1	Zm00001eb030570_P001
Poaceae	Zoysia japonica	1	nbis-gene-30473
Poaceae	Zoysia macrostachya	2	Zma_g25269, Zma_g26058
Portulacaceae	Portulaca oleracea	5	evm.TU.LG02.410, evm.TU.LG05.246, evm.TU.LG08.1866 ... evm.TU.LG09.1653, evm.TU.LG25.1067
Posidoniaceae	Posidonia oceanica	3	gene.Posoc03g28150, gene.Posoc04g06780, gene.Posoc06g16910
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_1_RagTag.2148, evm.TU.Scaffold_3_RagTag.307 ... evm.TU.Scaffold_6_RagTag.1939
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-17195, nbisL1-mrna-549, nbisL1-mrna-5956
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-11255, nbisL1-mrna-14543, nbisL1-mrna-16927 ... nbisL1-mrna-7099
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-11853, nbisL1-mrna-3389, nbisL1-mrna-6032
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000011l.1182, evm.TU.utg000016l.178 ... evm.TU.utg000016l.179, evm.TU.utg000019l.1061
Rhizophoraceae	Kandelia obovata	4	Maker00008370, Maker00012723, Maker00016257, Maker00017354
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-15547, nbisL1-mrna-4740, nbisL1-mrna-6464
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-14077, nbisL1-mrna-2275, nbisL1-mrna-3159
Salicaceae	Populus euphratica	5	populus_peu08944, populus_peu14269, populus_peu23478 ... populus_peu36415, populus_peu37454
Solanaceae	Lycium barbarum	2	gene-LOC132599116, gene-LOC132623225
Solanaceae	Solanum chilense	2	SOLCI002767500, SOLCI003385200
Solanaceae	Solanum pennellii	2	gene-LOC107010039, gene-LOC107011325
Tamaricaceae	Reaumuria soongarica	2	STRG.11377_chr02_-, gene_3820
Tamaricaceae	Tamarix chinensis	2	TC04G2149, TC10G0537
Zosteraceae	Zostera marina	1	Zosma06g06910.v3.1